Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0346 ATGAATCGTGTAGCATTGCCCAAATACCTTGCCCACCGTTGCAGAGGCATTCACCTCACAACTTGGAAGAGGTTTGGTAATCGTTGCGAAAGTCAGGTCCAAGGTGTCGGGCCCCTGGGCTCTCTTCTCAAGTCCCGTTCCGTTATACGGTTCCGCGGGCCTGACACCCTCAAGTTCCTACAGGGCCTCCTTACCAACGATGTACGGAGGTTGGGTGACCCCATTGGTGACAAAACTGAAAACTTGCCCACGCCGAACGTACCTGCTACGTCGATTCCTCCTATATATGCTGCCTTATTGACCCCTCAAGGGAGATTCCTCTACGACCTCTTTCTCTATAAGCCTCCCACGAGGGACACCAAGCTCGATAACACCGGCTCTGCTCCAGAGTCCAACTCCGATGAACCCTTTCATTTGTTTGCTGACGTGGATGCTTCTGTGTTGGATGAATTGTTGCAAACCTTCAACAAATACCGGTTGAGGTCAAAGGTTGACATTGATGATGTTTCAAGTGATTTCTCATGCTGGCAGCGTTATGGTGAAGATCCAGAAGCAGCCTCTGTTGGCTGGGGTGCTGGTGTGGATAGTACTGCAGTGTCATCTTCGCATGGGAGTGATAATGGGTGGCAATGGTTCAAGGATCCCAGATTGACCTCTCTTGGTTTCAGAGGGATCTTTCCATCGAATATAATTCCCCCTCTCATTGAGGTTGACAAAGAGACCGATGAACAGAATTTCCTTATGTGGAGAATAGAGAAGGGTGTGACTGAAGGATCAACCGAGATTCCAAAAGGTGAGGCGGTACCGCTGGAGTATAATCTTGCAGGCCTTAATGCAATTAGCTTTGATAAAGGTTGCTATGTTGGCCAAGAACTCATTGCTCGTACACATCACAGGGGGGTGATTCGGAAGCGGATAGTTCCTCTAAGGTTTCTGGACAACTATGGGAAAGAGTTAGTAAGCGAAGTCATTCCAGGCTCAGAAGTAATAAACACAACATCCGGTAAAAAAGCTGGTATAGTGACAACTGTCCTAGGATGTCGTGGTCTGGGGCTCTTGCGATTAGAGGAAGCTTTAAAGGGGTCCAATGCCTTGTCCATTCAGGGACAAGAGGATGTGAAGGTTGTCGCTAGTAGACCAGATTGGTGGCCTTCTGAATGGCTTCAAGATCATGGACAGCACGCTGCTTTTGCCTAG 1197 0.4871 MNRVALPKYLAHRCRGIHLTTWKRFGNRCESQVQGVGPLGSLLKSRSVIRFRGPDTLKFLQGLLTNDVRRLGDPIGDKTENLPTPNVPATSIPPIYAALLTPQGRFLYDLFLYKPPTRDTKLDNTGSAPESNSDEPFHLFADVDASVLDELLQTFNKYRLRSKVDIDDVSSDFSCWQRYGEDPEAASVGWGAGVDSTAVSSSHGSDNGWQWFKDPRLTSLGFRGIFPSNIIPPLIEVDKETDEQNFLMWRIEKGVTEGSTEIPKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRIVPLRFLDNYGKELVSEVIPGSEVINTTSGKKAGIVTTVLGCRGLGLLRLEEALKGSNALSIQGQEDVKVVASRPDWWPSEWLQDHGQHAAFA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0346 398 PANTHER UNCHARACTERIZED 29 386 IPR045179 -
Vra11g0346 398 SUPERFAMILY Folate-binding domain 42 301 - -
Vra11g0346 398 TIGRFAM ygfZ_signature: folate-binding protein YgfZ 246 310 IPR017703 -
Vra11g0346 398 Gene3D Probable tRNA modification gtpase trme; domain 1 27 380 IPR027266 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0346 Vra-Chr11 2495576 2498742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0346 K22073 - gmx:100804156 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0346 11 2495576 2498742 Vra11g0346 11 2495576 2498742 ECH