Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0345 ATGAAATTAACCTGGTCACCTGAGAGAGCATCCAGAGCATACATCCATACAGTCCAATCTTGTCGGGTTTTAAGCGAATCAGGAGTGGCGGAGTTCATTTCCGCCATGGCAGCGGGGTGGAACGCGCAGCTCATAGTGGAGACGTGGTCGCAGGGAGGACCTATTGCCACCAGCATCGGGCTAGCCGTGGCGCGCTCGCACACGTGCGGAAGGCACGTGTGCGTGGTTCCCGACGAGCGCGCGAGGTCGGAGTACGCGGAGAGAATGGGCGAGGCAGGGGTCGAGGCGGAGATCGTGGTCGGAGAGGCGGAGGAGGCTATTCAGGGTTTGGTCGGCGTGGACTTCTTGGTTGTGGATTCCCGGAGGAAGGACTTTCCACGCGTGCTGAGGCTGGCGAAGCTGAGTAACAAAGGCGCTGTGTTGCTCTGCAAGAACGCGAATTCAACTTCCAAGGGTTTCATCTGGCGGAGCTTGGTGGCGCAGGGTTCTTCTCGTCGCGTGGTTCGTTCGGCGTTTCTTCCCGTGGGGAAGGGACTCGACATGGCACACGTGTCTGCTTGCGGAAGTAATAGCACGGGACGTCGATGGATTAAGCATGTTGATCAACAATCAGGGGACGTGCATTTCATTCGGAGATGA 639 0.579 MKLTWSPERASRAYIHTVQSCRVLSESGVAEFISAMAAGWNAQLIVETWSQGGPIATSIGLAVARSHTCGRHVCVVPDERARSEYAERMGEAGVEAEIVVGEAEEAIQGLVGVDFLVVDSRRKDFPRVLRLAKLSNKGAVLLCKNANSTSKGFIWRSLVAQGSSRRVVRSAFLPVGKGLDMAHVSACGSNSTGRRWIKHVDQQSGDVHFIRR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0345 212 Pfam Protein of unknown function (DUF1442) 1 212 IPR009902 -
Vra11g0345 212 Gene3D Vaccinia Virus protein VP39 6 185 IPR029063 -
Vra11g0345 212 PANTHER DUF1442 FAMILY PROTEIN 1 212 IPR009902 -
Vra11g0345 212 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0345 Vra-Chr11 2487255 2488527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0345 - - gmx:100778228 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0345 11 2487255 2488527 Vra11g0345 11 2487255 2488527 ECH