Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0340 ATGGGCGATCTATTTGCTTGGCTCATCTCCTTCTTCCTCCTCATTGCCTTGCTTGTCCTCGTCACTTACCAGTTAATGTGCCTAGCAGACCTGGAATTTGATTATATAAATCCTTATGACTCCTCTTCTCGAATAAATGTGCTGGTTTTGCCTGAGTTTGCTACGCAAGCTGCCCTATGCTTCTTCTACCTTGTTACTCAGCATTGGATAATGGCACTCTTCTGCGCTCCTTATCTTTTCTTCAACATTCGATTGTACAGACGAAGAAGGCATTTGATTGATGTAACTGAGATATTCAACCAGCTCCACTGGGAAAAGAAGCAACGGCTAGTCAAATTCTTCTACCTTGTCTTTACCCTTTTCCTCTCAGTATTTTGGATGATTTACTCATCACTGGAGTAG 402 0.4229 MGDLFAWLISFFLLIALLVLVTYQLMCLADLEFDYINPYDSSSRINVLVLPEFATQAALCFFYLVTQHWIMALFCAPYLFFNIRLYRRRRHLIDVTEIFNQLHWEKKQRLVKFFYLVFTLFLSVFWMIYSSLE* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0340 133 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Vra11g0340 133 PANTHER CORNICHON-RELATED 1 133 - -
Vra11g0340 133 PANTHER CORNICHON FAMILY PROTEIN 1 133 - -
Vra11g0340 133 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0340 Vra-Chr11 2449306 2451608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0340 K20368 - gmx:100780362 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0340 11 2449306 2451608 Vra11g0340 11 2449306 2451608 ECH
Vra7g1430 7 31548820 31551917 Vra11g0340 11 2449306 2451608 PCT