Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0339 ATGGAGTGGCCTGCTTGCACGGACGAATACGAAAAGCTTGTAATAAGAATGAGCACTCCCAGGGTTGTTATTGACAATTCCGTGTTCTCTTCAGCTACTCTTGTCAAGGTTGACAGTGCTAGAAGGCATGGTATTTTATTGGATGCTGTACAAGTGCTCACCGACCTGGACCTTTCTATAAAGAAAGCCTATATTTCTGCTGATGGCAAATGGTGTATGGATGTTTTTCATGTCACTGATCAAAATGGAAACAAGATAACGGACGAAAAGGTTTTAAAATATATTGAGCAGTCACTTGGGAACATTCAGTATGGAAGAACCAACAGTTCTAAAGGTCTCACTGCGCTGGAATTGACAGGAACTGACCGAGTCGGTCTTTTATCGGAGGTGTTTGCCGTACTGGCTGATCTTCAATGTGATGTGGTTGAGGCAAAGGTTTGGACTCACAATGGCCGGATTGCTTCCTTAATCTATGTAAAAGATTCTAGTTCTGGGTCTACTATTGAGGACTCTCAGAAAATTAAGAAGATTGAATTGCGCTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAATATTTCTGTTTCTATGGCTGCGATGCACACTGAAAGAAGGCTACACCAGATGATGTTTAGAGACCGTGATTATGAGAGGACTCCCATTCTTGAGGTTACTTCTGATAACCCAGTAGTGACGGTTCAGAATTGGGCAGGAAGAGGGTATTCAGTCGTGAATGTTCAGTGCAAAGATCGAACCAAGCTTTTATTCGATGTTGTATGCAATTTGACAGACATGGAATACGATGTTTTTCATGCAACTATTAACACAAATGATGACAGAGCATACTTGGAGTTTTATATAAGACACAAAGATGGCAGTCCAATTAGCTCAGAACCAGAGCGACAACGTGTAATTCAATGCCTAAAAGCTGCTGTAGAGAGAAGGGCATCTGAGGGCGTTCGGCTAGAGTTATGTAAAGAAGACAGGCAGGGGCTTCTGGCAGAAGTAATGAGAACTTTCCGCGAGAATGGGCTCAATGTGACCAGGGCTGAGATATCCACTGTAGGGAATATGGCTACAAATGTATTCTATGTAACGGATGCCATTGGAAATCCAGCTGATTCAAAAATTATTGAATGTGTTAGGCAGAAAATTGGGTTAAGCTATTTAGAAGTGAAGGAATTGCCGTTGGTAAATCATCAGGAGATGCAGAGAGAGGATCAAGCGGTTGGAATTGGTGGGGCAGTGTTGTTTTCCATAGGGAGTCTGGTGAAAAGAAATCTGTACAGTTTGGGATTAATCAAATCCTGTTCCTGA 1326 0.4193 MEWPACTDEYEKLVIRMSTPRVVIDNSVFSSATLVKVDSARRHGILLDAVQVLTDLDLSIKKAYISADGKWCMDVFHVTDQNGNKITDEKVLKYIEQSLGNIQYGRTNSSKGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDSSSGSTIEDSQKIKKIELRLRNVLKGDNDIRSANISVSMAAMHTERRLHQMMFRDRDYERTPILEVTSDNPVVTVQNWAGRGYSVVNVQCKDRTKLLFDVVCNLTDMEYDVFHATINTNDDRAYLEFYIRHKDGSPISSEPERQRVIQCLKAAVERRASEGVRLELCKEDRQGLLAEVMRTFRENGLNVTRAEISTVGNMATNVFYVTDAIGNPADSKIIECVRQKIGLSYLEVKELPLVNHQEMQREDQAVGIGGAVLFSIGSLVKRNLYSLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0339 441 SUPERFAMILY ACT-like 111 172 IPR045865 -
Vra11g0339 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Vra11g0339 441 CDD ACT_ACR_1 32 100 - -
Vra11g0339 441 Gene3D - 113 186 - -
Vra11g0339 441 CDD ACT_ACR_2 114 187 - -
Vra11g0339 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Vra11g0339 441 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Vra11g0339 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Vra11g0339 441 CDD ACT_ACR_3 244 318 - -
Vra11g0339 441 CDD ACT_ACR_4 322 393 - -
Vra11g0339 441 SUPERFAMILY ACT-like 30 97 IPR045865 -
Vra11g0339 441 SUPERFAMILY ACT-like 320 385 IPR045865 -
Vra11g0339 441 Pfam ACT domain 116 168 IPR002912 -
Vra11g0339 441 SUPERFAMILY ACT-like 244 311 IPR045865 -
Vra11g0339 441 ProSiteProfiles ACT domain profile. 115 192 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0339 Vra-Chr11 2444436 2447564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0339 - - gmx:100780903 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0339 11 2444436 2447564 Vra11g0339 11 2444436 2447564 ECH