Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0329 ATGATGATGATGACGACGGAGGAGGAAGACATGGAGATAGAAGAGTCACAGGTGTTTGTTGCTCATGAGATTGATTTGGATTATGAGTTCGACGCAGTTCGATTCTTCGATTTCAGCGTGCAAGAAACTCCTGATCAAGCTCGCCAAGCTCAACTCTGGTTTCAATCCGCCGTCAGCTACCCTCCTTCCCCTTTTGTGGTGAAGCTAGTGGTGAGAGAGGACGAATCAGAGGGTCTGGAATGCGCAACCACCGTTCACGGTGCCAAGCCTAACAATGTTCCGTCGGGGATTGGATTTTCGCGCTCCGTTTTTCACTATGACGGTGGTTCAAAAGGAGGGGATGAGAGCGGGAACATCTCTGCCTTGCTGAGTGGAGTTCCACGGGATGTTAACGGGAAACTATTACAAGTAACTCCAGGACTGACCTTTAGTAGCAAGACAATCAATGGCAATTTGAGTTCAAAAGTTAAACCTTCTGCCATGAAGGGTTCAACACTAATGAAACCTACTGCTAGTCAGTTGGCTAAGCAAAATCGGCCCCATCAAATTGTTAGCTCGAGGTTTCAGAAAGTACAAGATGGCAACAAAAAAATGAATTTGTCTACGTCTTTTGGCACAGAGTGTCAAGCTCCCAAACGACAGAAATTAGAAGGTGGCAGTTTGCACAAGGTTGGTGATGTGAAGCAGCAAGTTAATTTTGTCCACAAGGCACCTAAGAAGGTTGCAAGTGTTGATCAAAATTGTGGACATTCCAAGCTGAAGATTACAATTCCTAGAGAGCCTGACTTAGAAACAGCTCACAGAGCACAAAGGATTAGACCTAAAAATGCTGCAGAGGCAGAAGTTGTGACAGTGGCAGCCCCCAGATTCAAAGCCCGGCCATTAAACAGAAAAATCCTAAATGCTCCTTCGTTACCATTTTCCAAGAGGAGCACACCACGATTGCCTGAATTTCAAGAATTTCATCTGAAGACACAGGAGAGGGCCATGCAGCATACATCTGCGTCTTCATCATCTTCACTTCATTGCAATGATTCAAATAAGGATTTGGACAAACCTACCACTGTTTGTGCTCAAGAAAATAGAATCGGGGATTTGAGAAGGCCATCTGCCATGGGTGCTTCAAAGCATGATGGGTTGGATTTTGCACATAGTTTTAAAGCTCGGCCTCTTAATAAGAAGATTCTTTCAAGTAAAGGAGATATTGGTGTTTTCCGGAACAGAAAGCAGGAAACCACTGTGCCAATGGGATTTAACTTCCATACGGAAAAGAGGATTCAGCATAACCCACCAATTGAACTCTTTAGCAAGGAAACGCCTTTCATATTTGGAGGAAAGCAAATTCATAGTAGGAGAGAAGGCTGCGACCCTGAACCCGGTACTCTGTTAACTGCGAGGAGGAGCTTGGGTATTCGATGA 1419 0.4482 MMMMTTEEEDMEIEESQVFVAHEIDLDYEFDAVRFFDFSVQETPDQARQAQLWFQSAVSYPPSPFVVKLVVREDESEGLECATTVHGAKPNNVPSGIGFSRSVFHYDGGSKGGDESGNISALLSGVPRDVNGKLLQVTPGLTFSSKTINGNLSSKVKPSAMKGSTLMKPTASQLAKQNRPHQIVSSRFQKVQDGNKKMNLSTSFGTECQAPKRQKLEGGSLHKVGDVKQQVNFVHKAPKKVASVDQNCGHSKLKITIPREPDLETAHRAQRIRPKNAAEAEVVTVAAPRFKARPLNRKILNAPSLPFSKRSTPRLPEFQEFHLKTQERAMQHTSASSSSSLHCNDSNKDLDKPTTVCAQENRIGDLRRPSAMGASKHDGLDFAHSFKARPLNKKILSSKGDIGVFRNRKQETTVPMGFNFHTEKRIQHNPPIELFSKETPFIFGGKQIHSRREGCDPEPGTLLTARRSLGIR* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0329 472 PANTHER CELL CYCLE REGULATED MICROTUBULE-ASSOCIATED PROTEIN 11 437 - -
Vra11g0329 472 Pfam Cell cycle regulated microtubule associated protein 253 420 IPR027330 -
Vra11g0329 472 PANTHER TARGETING PROTEIN FOR XKLP2 11 437 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Vra11g0329 472 MobiDBLite consensus disorder prediction 452 472 - -
Vra11g0329 472 MobiDBLite consensus disorder prediction 329 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0329 Vra-Chr11 2362163 2368597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0329 - - gmx:100806215 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0329 11 2362163 2368597 Vra11g0329 11 2362163 2368597 ECH