Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0326 ATGTCTTCTGATAGCGCAAAGGAAAATATGTCGGTAGTTGATTCATCTGTCACTGAATGGAGGAATGACATTGGAAATTCAGATGATCCAGAGAGCTCCTCTTACAAGTTTAATGAAAACAATAATCCAATTCGGACAGATATAGCGGAACACTCTTATGGTCTGATAGGGCATCCAACAGGAATTGAAGTGGAAAAGTGGAATGATATTAAGTATTTCATCATTAAGAGTTTGAACCGTCAAAATATTGATTTGTCTATTAAGAAAGGAATTTGGGCTACTCAAATTATGAATGAACGGATTCTAGAAGAAGCTTTTCATCATATGTTGCAGAACTCGGGCTGTGTAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGATACGCACAAATGATGTCTTCCATTGGAAAGGGTAGAGACAATGTTTGGAGTGAGGGAATTGGTAAAAGTAATCCTTGGGGCCGAAGTTTTAAGGTCCAGTGGCTGCGTTTCAATGATTTGCCTTTCCACAAAACTCTACATCTCAAGAATCCGTTGAATGACTATAAGCCTGTCAAAATTAGCAGAGACTGTCAGGAGTTATCTCCAGACATTGGCCTAGCTCTTTGTGAACTTCTTGATGGTAAGAATGATACCAATGACCTACTGACCAGCTCATTAAGGGGTGATTTTTCATTTAAGGGTCGCTATGTGAGTACTCCAAGTTCAATGGGAGACGAAGAATATAAATTTCGTCCATTTCATATGTCATGGTCAATGCCCCTGCCTTATTCTTCCCTGTTTTACCAAAATCAACCCGTAGTAAATGAATTTCGTTCAACAAAGCAGAGATTCAGTGGGACAATGCTTACTGAAACACTGCCTATCACTTCTTCTGCGTCGCCACAACTGTCAGGGATTAAACGTGCTCATTATGGTGGACATATTCCAGAGCTACAAACAAAGAAGGACATGTCTTCTCAATTAGATTTTTGGGGTGTGTCTACAGGCTGCCCGTTAGCTGGTAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGGAGGTCCATAGCAGAGGCAAGAAACAGCAACTAAACCATGTTGGAAATGAATGGAATTGCTGA 1131 0.4023 MSSDSAKENMSVVDSSVTEWRNDIGNSDDPESSSYKFNENNNPIRTDIAEHSYGLIGHPTGIEVEKWNDIKYFIIKSLNRQNIDLSIKKGIWATQIMNERILEEAFHHMLQNSGCVILIFSVNMSGSFQGYAQMMSSIGKGRDNVWSEGIGKSNPWGRSFKVQWLRFNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNDTNDLLTSSLRGDFSFKGRYVSTPSSMGDEEYKFRPFHMSWSMPLPYSSLFYQNQPVVNEFRSTKQRFSGTMLTETLPITSSASPQLSGIKRAHYGGHIPELQTKKDMSSQLDFWGVSTGCPLAGSTLTEDDFLDMSYEEYLEEVHSRGKKQQLNHVGNEWNC* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0326 376 MobiDBLite consensus disorder prediction 1 40 - -
Vra11g0326 376 Pfam YT521-B-like domain 71 209 IPR007275 GO:0003723
Vra11g0326 376 Gene3D ph1033 like domains 62 222 - -
Vra11g0326 376 ProSiteProfiles YTH domain profile. 70 209 IPR007275 GO:0003723
Vra11g0326 376 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 9 329 IPR045168 -
Vra11g0326 376 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 9 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0326 Vra-Chr11 2344858 2349055 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0326 K20100 - gmx:100784130 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0326 11 2344858 2349055 Vra11g0326 11 2344858 2349055 ECH