Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0325 ATGGTGGGTACAGTGGGTCCGAGAGTTGAAAGCTTGGCGAGCAGTGGGATAAAGTGTATCCCCAAGGAGTACGTCAGGCCGCAAGAGGAGTTGGAGAACATAGGAAACGTCTTCGAGGAGGAAAAGAAGGAAGGGCCTCAAGTTCCAACCATTGACCTGGGAGAGATAGATTCGCCGTCGGAGGTTGTTCGAGGGAAGTGTCGGGAGAAGCTGAAGAAAGCGGCGGCGGAATGGGGCGTGATGAACCTGGTGAACCATGGCATCCCTGAGGAGCTCTTGAATCGGCTGCGGAAAGCTGGGGAAACCTTCTTCTCTCTTCCAATTGAGGAGAAGGAGAAGTACGCCAACGACCAAGCCACTGGGAAGATTCAGGGGTATGGAAGCAAGCTTGCCAACAATGCCAGTGGCCAATTGGAGTGGGAAGATTACTTCTTCCACCTTGTTTATCCTGAAGAGAAACGCGACCTCTCCATCTGGCCAACCAAACCTTCTGATTACACTGAGGCTACAAGCGAGTATGCAAGGCAACTGAGGAGGCTTGCGACGAAGATACTGGAGGCACTGTCTATTGGATTGGGGTTGGAAGGTGGAAGATTAGAGAAGGAAGTGGGTGGAATGGAAGAACTTTTGCTTCAGTTGAAGATCAACTACTACCCAATCTGTCCACAGCCGGAATTGGCTCTGGGAGTTGAAGCTCACACAGATGTAAGTTCACTGACCTTCCTCCTTCATAACATGGTGCCGGGTCTGCAACTTTTCTACAAGGGCAACTGGGTGACGGCGAAGTGTGTGCCTAATTCCATTTTCATGCACATCGGAGACACCATTGAAATCCTGAGTAACGGGAGGTACAAGAGTATTCTCCACCGGGGATTGGTGAACAAAGAAAAAGTTCGAATATCCTGGGCCGTGTTCTGTGAACCCCCGAAGGAGAAGATCATCTTGCAGCCACTGCCTGAACTCGTGACGGAGAAAGAACCGGCACGTTTTCCTCCCCGCACTTTTGCTCAACATATTCACCACAAACTTTTCAGGAAGGACGAGGAAGCTCTTCCGAATTGA 1062 0.5066 MVGTVGPRVESLASSGIKCIPKEYVRPQEELENIGNVFEEEKKEGPQVPTIDLGEIDSPSEVVRGKCREKLKKAAAEWGVMNLVNHGIPEELLNRLRKAGETFFSLPIEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLVYPEEKRDLSIWPTKPSDYTEATSEYARQLRRLATKILEALSIGLGLEGGRLEKEVGGMEELLLQLKINYYPICPQPELALGVEAHTDVSSLTFLLHNMVPGLQLFYKGNWVTAKCVPNSIFMHIGDTIEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILQPLPELVTEKEPARFPPRTFAQHIHHKLFRKDEEALPN* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0325 353 Pfam 2OG-Fe(II) oxygenase superfamily 213 308 IPR044861 -
Vra11g0325 353 SUPERFAMILY Clavaminate synthase-like 7 345 - -
Vra11g0325 353 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 349 - -
Vra11g0325 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 48 161 IPR026992 -
Vra11g0325 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 308 IPR005123 -
Vra11g0325 353 Gene3D - 5 351 IPR027443 -
Vra11g0325 353 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0325 Vra-Chr11 2341527 2342917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0325 9 338 Glycosyltransferase AT5G59530 28.909 6.59e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0325 K05277 - gmx:100801148 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0325 11 2341527 2342917 Vra11g0325 11 2341527 2342917 ECH