Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0324 ATGGCTACCAAACTCACCTTCACACTGTTATACCCGCGACCATTCACTTCCCCTAGACCGACGCCTTTCATTCCAATCTCTTCCTTCTCCTCCACTTCCGTTTCTCCTCTCCACCTTCTTCAATTCAATGCTCGCCGCTTCTGCCTTCGCCGCCGGCTATTTCTGTTTTCTGTCAGGGCCACTGCCGATCAAGGCAAGGCTGAGGAAGATGACGTTGTGGATAGTAAAATCCTACCCTACTGTAGCATAGACAAAAAGGAGAAGAAAACAGTTGGTGAACTCGAGCAAGAGTTTCTTCAAGCACTGCAAGCATTCTATTATGAGGGGAAGGCTATCATGTCAAACGAAGAATTTGATAATCTTAAGGAAGAACTCATGTGGGAAGGGAGCACCGTTGTGATGCTAAGTTCAGAAGAGCAAAAATTTCTGGAAGCGTCTATGGCCTATGTATCCGGAAAACCAATCCTGAACGACAAAGAGTTTGATGATTTGAAACTCAGGCTAAAGATGGAAGGGAGCGAAATTGTGGCTGAGGGTCCTCGGTGCAGTCTTCGTAGTAGAAAGGTCTACAGTGACCTGTCTGTTGACTATTTGAAGATGTTCCTGCTGAACGCCCCAGCTACTGTGCTTGCACTTGGACTGTTCTTCTTCCTTGACGATTTGACTGGATTTGAGATCTCATATCTGATAAAGATTCCAGAGCCATATAGTTTTATTCTAACTTGGTTTGCCGCCATTCCCTTTATTTTGTGGCTGGCGCAATCAATTACAAAGGCAATTATAAAAGACTCTTTGATTTTAAAGGGCCCCTGTCCTAACTGTGGCACTGAAAATACCTCTTTCTTTGGGACAATACTGTCAGTTTCAAGTGGCGATTCCACCAACAATGTCAAATGTGAAAACTGTGAGACTAAAATGGTGTATGATTCAAGAACAAGATTGATTACATTGCCGGAAGGAAGCAGTGCCTAA 972 0.4414 MATKLTFTLLYPRPFTSPRPTPFIPISSFSSTSVSPLHLLQFNARRFCLRRRLFLFSVRATADQGKAEEDDVVDSKILPYCSIDKKEKKTVGELEQEFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSTVVMLSSEEQKFLEASMAYVSGKPILNDKEFDDLKLRLKMEGSEIVAEGPRCSLRSRKVYSDLSVDYLKMFLLNAPATVLALGLFFFLDDLTGFEISYLIKIPEPYSFILTWFAAIPFILWLAQSITKAIIKDSLILKGPCPNCGTENTSFFGTILSVSSGDSTNNVKCENCETKMVYDSRTRLITLPEGSSA* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0324 323 PANTHER PGR5-LIKE PROTEIN 1A 1 323 - -
Vra11g0324 323 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 1 323 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0324 Vra-Chr11 2335124 2338213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0324 - - gmx:100785186 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0324 11 2335124 2338213 Vra11g0324 11 2335124 2338213 ECH
Vra7g1454 7 31809074 31812509 Vra11g0324 11 2335124 2338213 PCT