Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0315 ATGATGAAAGGTTCAAAGCGTTTGGCTGTGTCAGAGCCCAACCAGGTCGATACTAACGAAGCACCGATGCAGTTCCGCAATAAAAGAATAATGGAAGGATCCCTCTTTGATGTTCATAGGGCTGAACCATCTCAACAACCAACGGTGACAGCACCACCATTGGATATGAAACGGGCAGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAATTTGCAAGTTGGGTTCAAACACAACTAAAGAATCATCCGGATGAGCTTTGGGAAGACGGTGTGAGAGATTACTTAAATCATGCTTCAAGCATTATGGAAAAGTTCAGTGATGTTGTCAACTGGCTCAAAGCAAATGCATCCAAGCCAGAAAATTCAGTTGCTGAGGCCAGTGCTGCTTTTTCTGCAAAAAAACTCTTGCCTGAAGTAGTAAACAAAGAAAATAAATCTTTTGGAGAAAAAACTGGGTTTACTCCTGTTACAACTCCTACAAGTTTTTCTAGTTCATGGAGTCCTGGATTATTTTCGAGCAGTCAAAGCATTTTTGGATTTGGTAACCAAAGTTCAGCTCCCTCTAACCACAAGGCTTCAGTTGACGTAGATGAAGAAAATGAATTGGAGCAGCCTAGCAGCCCATCAGTTAAGAAGACAGAAGAGAAAGGTGTAGTTGTTGTACATGAAGTAAAGTGCAAGCTTTATGTGAAGTCGAGTGATCCAGAAGATAAAGATGTATGGAAAGATAAAGGAATGGGTCAACTGTCTATTAAATGCCAAGAAGGTGTCAGCAAGGCTACCAAGGAATCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATCAAGACGAACCCGCAGAAGAACTCTCTTGTTGCAATATTCCATACTACGGGTAATGCTGACGGAAGTGGGGATAACGATAGTGTAGTTGCACGTACATTCTTGATCCGAATGAAAACAGAAGATGATCGAAATAAGCTGGCTTCAACAATCCAAGAATATGCTCCTGTATCTTGA 1041 0.4131 MMKGSKRLAVSEPNQVDTNEAPMQFRNKRIMEGSLFDVHRAEPSQQPTVTAPPLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLNHASSIMEKFSDVVNWLKANASKPENSVAEASAAFSAKKLLPEVVNKENKSFGEKTGFTPVTTPTSFSSSWSPGLFSSSQSIFGFGNQSSAPSNHKASVDVDEENELEQPSSPSVKKTEEKGVVVVHEVKCKLYVKSSDPEDKDVWKDKGMGQLSIKCQEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNPQKNSLVAIFHTTGNADGSGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0315 346 MobiDBLite consensus disorder prediction 1 24 - -
Vra11g0315 346 ProSiteProfiles Ran binding domain type 1 profile. 214 341 IPR000156 GO:0046907
Vra11g0315 346 SMART ranbd_3 204 342 IPR000156 GO:0046907
Vra11g0315 346 Pfam RanBP1 domain 212 341 IPR000156 GO:0046907
Vra11g0315 346 SUPERFAMILY PH domain-like 213 343 - -
Vra11g0315 346 Gene3D - 116 345 IPR011993 -
Vra11g0315 346 PANTHER RAN BINDING PROTEIN 7 344 IPR045255 -
Vra11g0315 346 MobiDBLite consensus disorder prediction 184 216 - -
Vra11g0315 346 CDD RanBD_NUP50 215 343 - -
Vra11g0315 346 MobiDBLite consensus disorder prediction 194 216 - -
Vra11g0315 346 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 7 344 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0315 K14295 - gmx:100816975 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0315 11 2248398 2254303 Vra11g0315 11 2248398 2254303 ECH