Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0281 ATGAGGTACATGAAGCCCTTGCAGTTGTTCCAGCATTTGAGTAATTCAACCCGAAACCAACGGGGAAGGTTGCTCGGTTTGGATGTCGGGGAGAAATATGTTGGCCTCGCTCTTTCTGACTTTGACAACAAAATTGCTTCACCTTTCAGTGTTCTCGTCAGGAAGAAGTCAAATATTTGTTTAATGGCTTCTGATTTTCAGAATCTGATGTCTAAATATTCCCTGAAGGGATTTGTTGTTGGCCTCCCTTTTGACAGGCATCGGGTGGCTTCTGAAGCTGCGCCGGTGAAGATCTTAATTGATCACCTCTGTAGAACAAAAATGCTTGAAGGAGTAAAGTATACATATTGGAATGAGTGCTTTACATCAAAGAATGTGGAATTGCTGTTAAAACCTTTGAACTTGAATCATCCCGTACTCTCCAAGACTATTCTAGACAAGTTTGCAGCGGTAGGAATACTTCAAGGGTACCTGGATTTTGTCAACAGGAAGATGAAGCAGACAGCAGTGGAGTGTAGGCATGGGTCACAAATCACAACTACCTCTGAATTAAAGCCTGTAACCGACTGA 570 0.4263 MRYMKPLQLFQHLSNSTRNQRGRLLGLDVGEKYVGLALSDFDNKIASPFSVLVRKKSNICLMASDFQNLMSKYSLKGFVVGLPFDRHRVASEAAPVKILIDHLCRTKMLEGVKYTYWNECFTSKNVELLLKPLNLNHPVLSKTILDKFAAVGILQGYLDFVNRKMKQTAVECRHGSQITTTSELKPVTD* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0281 189 Gene3D - 21 170 IPR037027 GO:0006139
Vra11g0281 189 SMART rnase_8s 22 126 IPR006641 GO:0006139
Vra11g0281 189 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 167 IPR005227 GO:0006364
Vra11g0281 189 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 162 IPR005227 GO:0006364
Vra11g0281 189 CDD YqgF 24 159 IPR005227 GO:0006364
Vra11g0281 189 Pfam Holliday junction resolvase 23 159 IPR005227 GO:0006364
Vra11g0281 189 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 167 - -
Vra11g0281 189 SUPERFAMILY Ribonuclease H-like 22 161 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0281 - - gmx:100305864 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0281 11 1996597 2000147 Vra11g0281 11 1996597 2000147 ECH