Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0278 ATGGTGAATCGTCGACGCTTTATTCGAGTTGCAGTGAGCGACGATGAAGATGAAGCATCACGTCCACGACGAACGCGGAAAAGATTGAGGCTTTTTGAGGAAGAGGAAGACGACGATAATGATAACAAGAATGAAGAACAACAACTGCAGAAAAAAGAAGAGGTACCAGAATCGCCTCAGCCTGCGGAGGATGCTACTCCTATTGGTAAACCAATTAGGTTTTCGGGAAAAGGAAAAGGCAAGAGAAGTCACTACGAGTCCTTCATGTTCAATGGCATCGAATATACTCTTGAGGATTCTGTTCTTCTCTTTCCCGAGGGAAAAGGCCAAAAGCCATATGCTGCAATTATTAAGGACATTAAACAAGGAAGTAATGGTAATGTGATAGTGACGGGACAATGGTTTTATCGTCCTGAAGAAGCTGAGAAAAAAGGTGGCGGGAACTGGAAATTACACGATACAAGGGAGTTATTTTATAGTTTCCATCGTGATGATGTTCCTGCTGAGGCTATCATGCACAAGTGTGTGGTGCATTTTGCTCCCATACATAAACAACTTCCAAAACGTAAGGATCATCCTGGGTTTATTGTACAAAAGGTATATGACAGTGTGGGAAAAAAACTTTGGAGATTGGGTGATAAAGTTTATGAGGATACTAAGCAGCGAGAGATTGATGTGCTTATTCATAAGACTCTACAACGTATTGGTGAACTACCTCGTATTGAGTTTGTGGAAACCACTGATGATGCGCATGACCAGATGAAAAGTAAAAAAGTTTGA 780 0.4141 MVNRRRFIRVAVSDDEDEASRPRRTRKRLRLFEEEEDDDNDNKNEEQQLQKKEEVPESPQPAEDATPIGKPIRFSGKGKGKRSHYESFMFNGIEYTLEDSVLLFPEGKGQKPYAAIIKDIKQGSNGNVIVTGQWFYRPEEAEKKGGGNWKLHDTRELFYSFHRDDVPAEAIMHKCVVHFAPIHKQLPKRKDHPGFIVQKVYDSVGKKLWRLGDKVYEDTKQREIDVLIHKTLQRIGELPRIEFVETTDDAHDQMKSKKV* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0278 259 MobiDBLite consensus disorder prediction 8 34 - -
Vra11g0278 259 MobiDBLite consensus disorder prediction 44 59 - -
Vra11g0278 259 Coils Coil 35 55 - -
Vra11g0278 259 Pfam BAH domain 94 208 IPR001025 GO:0003682
Vra11g0278 259 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 258 - -
Vra11g0278 259 Gene3D - 3 194 IPR043151 -
Vra11g0278 259 SMART BAH_4 93 212 IPR001025 GO:0003682
Vra11g0278 259 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 258 - -
Vra11g0278 259 MobiDBLite consensus disorder prediction 1 82 - -
Vra11g0278 259 ProSiteProfiles BAH domain profile. 93 212 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0278 Vra-Chr11 1961901 1962966 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0278 - - gmx:100776280 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0278 11 1961901 1962966 Vra11g0278 11 1961901 1962966 ECH