Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0276 ATGGGGCAAGAATTGGAGTTAGATCTGAACGACAAGTCTTCCGTGGGTCTTAGTCCCGACACAGTTCTTCCATCTCAGCAATATTGTTTGAATGTGAAGAAAATATATAAAAATGGGAAACCCACTGGGAAAGATGATTTTTTGAAACTTAAAGAGAACTTTGCTGATATCAATTTTGGTAGGTCCCGTAATTCTTCTTCACATAAGAGCCTTACCTTTAGATCTCATGGACTTGAAGGTAATTTAGAAATTAGAAAAGGTTCCAAGTATGAGACTTCAGAGCAAGCTATAAGTATAAAGAAAATGAGCACCATGAGGGGAAGGAAAAAAATAGAAATTTCATCTAGGAGTAGTGATGCCTCTTTTTCGGGTAGTGTTGTTGATTCTCTGTGCGGTTCAGATGATGAAAGTAGGGACGAGAGACCTTCAGTAATATCCCAGGACTCTAATTTAGGTTCACCATTTTCATCTGTTTCTGGTTCCTGTGCTGGAATGGAGAACAACACTTCAAATGGCTATATTGAATTTTGCTTAAATTCGGATGTTTGGGATGAAAAATATGGTGCTGTAGAAGGGATTGGTTCTATAAATACAGAAAGCATAGGTGAAAAGGTTGTTTGTTCATTGATCGATGGTAATTATCATCTCAAAAAAGATTCAGTTCATGGATTTCAAAAGTCAGTCTCTTCTGTAGTTGAAATCTCTCACATGCAATCTCCTTTCGAGAGTGACTGCTCTCCAAGAGCAAGTCCAAAAGTCTCACTCGCCTCTATGAGGAAAAGGTTAACTCCATTCACAAAGTCGAAAACTTTGACTAGCCCAGTGAGTTGTGTGCTGGAAACTGAGGTCAAATTAACTCGTACTAGAAATGGTACAAGAAACAGGACTTATCAGAGATCTTTGTTAAATGACTTCTCTGGCACAGCAAAGCATTCTGACATTATTTCTGAATTTATCAATAGAGATATCCAGTTTTCAGGTCTATCATGCTCACCTGTTCATCTTCATGGCAAACTCAAGTTGAAAAACAAACATGGACTGCCAGTTTTTGAGTTCAGGGTAAAGTGCCCTGAAGATGTCTTTGTGGCAAAGACCTGGAAATCAGACAATGCTTTCAACTGGGTGTATACCTTTCACTCAATGGATAATAGAAAGAAGAGTACGGCCTCTGACTTTGGATCCCATTATTCTGACAAAGATTCATCAATGGTAGCACAGATGCTAGCTTCCTCTGATTCATGTTCGAAATTAGAAGTTGGAATGTTTGACAACTCTATGGTGACAGAATTTGTGTTGTTTGATCTTGCACGCTCAAGAAAAAGTGTTTTGCCGGAAAAAAAGCCTTACAGCGAGAATAATTGTTCTAGCACTCTAAAAGATTCCCGTGTAGGAATGAAGAGAGAAACTTTGAGACCAGACGAAGAGACTTTGGCAACTAAAAGCAAGCCTATATCAAGCAATGCGTGTTTTGACAATTCAAATTCTTATCCTTTGTCATCCACAGAATTATATTCAAACCCTGAGATGGCTGCCATTCTTTTGCAAATTCCTTTTCGCAAGAGTGAAAGCTTGAAATGCGAAAGGAAGGATAGAGTGAAGGCTGAAATGCGAAAAAGCCTTCATAACGGAAAAGTCCTAGAACAGGTGAAGGTGGTACTACCAACTGGCAACCATGGCTTGCCAAGTTCTGATAGCCAGGGTCCCTCATCATTACTTGATCGATGGAAACATGGTGGAGGTTGTGATTGCGGTGGCTGGGACATGGCGTGTCCCCTTATTCTCTTAGGCAACCCTGCTGTTCAATTTGCTGACGACAACCCTCTTATGGAGGAATATCAAACTCTGGAACTTTTCACTCAGGGAGTCAAAGAACGAACTCCTACATTTGGCATGACCATGGTTGAAGAGGGGCAATATGCAGTTGATTTCCATGCACAGTTATCTCCATTACAAGCTTTCTCCATTTGTGTTGCCATTTTGCATGGCACCTCCACCTTCGGCGGTTCGGGGCAGGAGAAAAGGCAACAGATTTCTCGATGCAATTCATTGAAAATGCTTCTTGAGGAGGAGGTGGAGTTACTGATGAACTCAGTGACCAAAGGTGAGAAAAAGAACGTGTCCAAGATTCATAAAGGAATTCCTCGATCCTATGTGCCAAACCCACCTTTTTCTCCTATTGCTCGCGTGTAA 2190 0.4068 MGQELELDLNDKSSVGLSPDTVLPSQQYCLNVKKIYKNGKPTGKDDFLKLKENFADINFGRSRNSSSHKSLTFRSHGLEGNLEIRKGSKYETSEQAISIKKMSTMRGRKKIEISSRSSDASFSGSVVDSLCGSDDESRDERPSVISQDSNLGSPFSSVSGSCAGMENNTSNGYIEFCLNSDVWDEKYGAVEGIGSINTESIGEKVVCSLIDGNYHLKKDSVHGFQKSVSSVVEISHMQSPFESDCSPRASPKVSLASMRKRLTPFTKSKTLTSPVSCVLETEVKLTRTRNGTRNRTYQRSLLNDFSGTAKHSDIISEFINRDIQFSGLSCSPVHLHGKLKLKNKHGLPVFEFRVKCPEDVFVAKTWKSDNAFNWVYTFHSMDNRKKSTASDFGSHYSDKDSSMVAQMLASSDSCSKLEVGMFDNSMVTEFVLFDLARSRKSVLPEKKPYSENNCSSTLKDSRVGMKRETLRPDEETLATKSKPISSNACFDNSNSYPLSSTELYSNPEMAAILLQIPFRKSESLKCERKDRVKAEMRKSLHNGKVLEQVKVVLPTGNHGLPSSDSQGPSSLLDRWKHGGGCDCGGWDMACPLILLGNPAVQFADDNPLMEEYQTLELFTQGVKERTPTFGMTMVEEGQYAVDFHAQLSPLQAFSICVAILHGTSTFGGSGQEKRQQISRCNSLKMLLEEEVELLMNSVTKGEKKNVSKIHKGIPRSYVPNPPFSPIARV* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0276 729 MobiDBLite consensus disorder prediction 116 130 - -
Vra11g0276 729 Pfam Domain of unknown function (DUF3527) 332 662 IPR021916 -
Vra11g0276 729 MobiDBLite consensus disorder prediction 108 154 - -
Vra11g0276 729 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 5 729 - -
Vra11g0276 729 PANTHER EXPRESSED PROTEIN 5 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0276 Vra-Chr11 1938704 1942492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0276 - - gmx:112998369 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0276 11 1938704 1942492 Vra11g0276 11 1938704 1942492 ECH
Vra11g0276 11 1938704 1942492 Vra7g3507 7 54356692 54361473 PCT