Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0267 ATGAAAGAATCGGAGAAAGTAACGTGGGATCAGGGTCGATGTACGGCGCAGGCACGATCCTTAGGCTTACCGAAGCTTATGGTATGGCTAATGCTCTTCGTTTCGCTCATCTACATGCTTTATACTCTGAAGCTCGTCTCAACATCGTCAAGCGCCTGCAACCACGCGCCTTTCATCATCAACCATCTCGCTTCTTCCTCTTTCCCCTACGCAAACGTCACGGAGAAGAGGGAATCCTCCTCCTCTTTGGGTACCGGAACGGGGAAGCGCCGTGACCAGAAAACGGAGCTCCGTCACGTGGTGTTCGGAATCGCGGCGTCGTCGAAGCTGTGGGAGCACAGGAAGAATTACATAAAGATTTGGTACAGGAAGAAGGAGATGAGGGGAGTGGTGTGGCTGGATGATCGCGTGAAGATCGACCCGGAGGAAGGGTTGCCGCCGGTGAAGGTTTCGACGGACACCTCTAATTTCGTCTACACCAATAAGCTGGGTCACCGCTCCGCCATTCGGATCTCCCGCATCGTCACCGAAACGCTGCGTCTGGGGCTCAAGGACGTGCGGTGGTTCGTCATGGGCGATGACGACACTGTTTTCGTGACCGACAACCTGCTGAAGATTCTGAACAAGTACGACCACAACCACATGTACTACATTGGGAGCTTGTCCGAGAGTCACTTGCAGAACATATTCTTCTCCTACGGCATGGCCTACGGCGGAGGGGGCTTCGCTATCAGCTACCCCTTGGCCAAAGCTCTGAGCAAAACTCAAGACCGTTGTATTCAGAGGTACCCTTCTCTGTATGGCTCCGATGATCGAATGCAAGCTTGCATGGCTGAACTCGGTGTTCCACTCACCAAGGAACTCGGTTTTCACCAGTATGATGTGTATGGGAACCTGTTGGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATATTCCCGAATGTTACCAGAATAGAAGCCCTTCAACGGCTTACCATTCCAATGAAGCTTGACTCAGCGTCCCTCGTTCAGCAATCAATTTGCTACGACAAGAAAAGAAAATGGACCATTTCGGTTTCATGGGGTTTTGCTGTTCAAATATTTCGTGGGATATTCACACAGAGGGAGATGGAAATGCCTTCAAGAACATTCCTGAATTGGTATAGAAGAGCAGATTACACTGCATATGCATTCAACACACGCCCAGTTAGCAGAAACCCTTGTCAGAAGCCTTTCGTGTTTTACTTCTCAAAGGCAAAACTGAATAATTCCACATTGAAACACACAGTGACTGAATATGACAGACATCTTGTTCCTCACCCAGAATGTCACTGGCAGATGCCTGATCCTTCTCAGCTTCAAAAAGTAGAGGTGCACAAGAAGCCAGACCCGCATCTATGGGATAGAGCCCCAAGGAGAAATTGTTGCAGAGTGATGAAAACCAACAAGACAGGAATCCTGAAGATAGACGTGGGTATATGCAGAGATGGCGAGATCCACGAACCTGTTTCATTGTGA 1533 0.4971 MKESEKVTWDQGRCTAQARSLGLPKLMVWLMLFVSLIYMLYTLKLVSTSSSACNHAPFIINHLASSSFPYANVTEKRESSSSLGTGTGKRRDQKTELRHVVFGIAASSKLWEHRKNYIKIWYRKKEMRGVVWLDDRVKIDPEEGLPPVKVSTDTSNFVYTNKLGHRSAIRISRIVTETLRLGLKDVRWFVMGDDDTVFVTDNLLKILNKYDHNHMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKTQDRCIQRYPSLYGSDDRMQACMAELGVPLTKELGFHQYDVYGNLLGLLAAHPVTPLVSLHHLDVVEPIFPNVTRIEALQRLTIPMKLDSASLVQQSICYDKKRKWTISVSWGFAVQIFRGIFTQREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKLNNSTLKHTVTEYDRHLVPHPECHWQMPDPSQLQKVEVHKKPDPHLWDRAPRRNCCRVMKTNKTGILKIDVGICRDGEIHEPVSL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0267 510 Gene3D - 87 346 - -
Vra11g0267 510 Pfam Protein of unknown function, DUF604 227 481 IPR006740 -
Vra11g0267 510 PANTHER FRINGE-RELATED 8 505 - -
Vra11g0267 510 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 8 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0267 Vra-Chr11 1849647 1854555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0267 4 506 Glycosyltransferase AT4G23490 66.089 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0267 - - gmx:100801504 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0267 11 1849647 1854555 Vra11g0267 11 1849647 1854555 ECH