Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0259 ATGGAAGATCTTCAAAATTCGGCTCTAAAGTTCTTCTCCGATCAAGAGCTCTGTAATGCCGATATCGTCCCTCCTGCTCAGGTTAGAGCGAGAATTGAAGTTTCTGTCCTCAATTTTCTCAAAATATTAAATGCATCAAGCCCTGCCATCTCAGATTTGCCTTTGATTCAGAGGAAATATAGCAATAGTCGAGTGAATCATGGCCTTTTGACAGAACTTTCACGTGTTTTTCTCACCAATTCCATATCGACAAGATCTCTGATGAGACCTAACGCAGCAAAGGCCTTCGTTAGGGTGTGGAAGGTGATGGAGATGTGCTATCAGATATTGCTTCAGGAAAAGCGGGTCACGCAGAGGGAGCTCTTCTACAAGTTGCTCTGTAATTCGCCACACCTGTTTCCCTCTCAAACGCATGTTAACAGGACAATCCAAGATCTAGTAGCATTGCTTCGGTGCAGCCGATACAGTCTTGGAATCATGGCTTCCAGTCGAGGACTCATAGCTGGCCGTCTGACTTTGCAGGAACCGGGCAAAGAGGTTGTTGATTGCTCTTTGTGTGGTTCTTCTGGATTTGCAATTTCTGGTGATTTGAATTTGTTACAGAGATTGGTTCTACATGCAGATGCTCGGTACATTATAATTGTGGAAAAGCACGCAATATTTCAGCGGCTTACTGAGGATCGGTTCTTTCATCAAATTCCGAGCATTCTTATCACTGCTAAAGGCTATCCAGACATGGCAACAAGATTTCTTCTTTATCGGATCAATCGAGCTTTTCCAGACTTGCCAATTTTAGCTTTGGTGGATTGGAACCCAGCTGGATTAGCCATTCTATGCACCTTCAAATTTGGAAGTGTAGGAATGGGCCTAGAGGCTTACAGATACGCTTGCAACGTCAAGTGGTTAGGACTGCGGAGTAATGATCTACCTTTGGTGCCTGATCAATCTTTCGTTCCATTGAAGCCAAAGGATCTGCAAATTGCTCGAAGCTTGATGTCCTCAGGAATATTACAGGTAAGTTATCCAGAAACCCCTCTAAATTTTGCCTCTACTGATAATTACAAGGATGAAGTGGCCGTAATGATTCAAAGAGGAAGCAGAGCTGAAATCGAGGCTCTATACTTTCATGGATATGACTATTTGGGGAAGTATATTGCTAAAAAAATTGTGCAGTCCGATTACGTATGA 1188 0.431 MEDLQNSALKFFSDQELCNADIVPPAQVRARIEVSVLNFLKILNASSPAISDLPLIQRKYSNSRVNHGLLTELSRVFLTNSISTRSLMRPNAAKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCNSPHLFPSQTHVNRTIQDLVALLRCSRYSLGIMASSRGLIAGRLTLQEPGKEVVDCSLCGSSGFAISGDLNLLQRLVLHADARYIIIVEKHAIFQRLTEDRFFHQIPSILITAKGYPDMATRFLLYRINRAFPDLPILALVDWNPAGLAILCTFKFGSVGMGLEAYRYACNVKWLGLRSNDLPLVPDQSFVPLKPKDLQIARSLMSSGILQVSYPETPLNFASTDNYKDEVAVMIQRGSRAEIEALYFHGYDYLGKYIAKKIVQSDYV* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0259 395 SUPERFAMILY DNA topoisomerase IV, alpha subunit 93 395 IPR036078 GO:0003677|GO:0005694
Vra11g0259 395 PRINTS DNA topoisomerase VI subunit A family signature 136 153 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vra11g0259 395 PRINTS DNA topoisomerase VI subunit A family signature 154 169 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vra11g0259 395 PRINTS DNA topoisomerase VI subunit A family signature 212 229 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vra11g0259 395 PRINTS DNA topoisomerase VI subunit A family signature 236 257 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vra11g0259 395 PRINTS DNA topoisomerase VI subunit A family signature 269 285 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vra11g0259 395 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 14 394 - -
Vra11g0259 395 Gene3D - 163 395 - -
Vra11g0259 395 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 14 394 IPR002815 GO:0003677|GO:0003918|GO:0005694
Vra11g0259 395 Pfam Type IIB DNA topoisomerase 94 159 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Vra11g0259 395 CDD TOPRIM_TopoIIB_SPO 210 380 IPR034136 -
Vra11g0259 395 Gene3D - 19 162 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0259 K10878 - gmx:100784732 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0259 11 1791890 1794589 Vra11g0259 11 1791890 1794589 ECH