Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0256 ATGAACGGGGCGGTGGGGTTGCCATTGCCGGCAAATTCGTCGCCATCAGTGATCAATATGTACAGAATACAAAAAGTTACGGAGCGTTTGGGTTGGCTTGCTCAACCTGGCAACCGAGGCGATCCTAAAGAATTTTATAACCACTGCCTCTCCCTCTCTCGAGGCATTGATTATGCACTGGCCAATGGGGAAATTCCAACCAATGCTCACGAGCTGCCTTTGCTGGTGAAGAAGATTTGTCAACTAAAGAATGACGAACTTTCGCAAGCTGCTATGATGGTATTGATGATATCTGTAAAGGGTGCCTGTGAAATTGGATGGTTCCAAACGAAAGAATCACAAGAACTTCTTACTATTTTGGATGAGATCGGAAAAGTCTTCAGCAGTATGGGGAGTATAAATGCTACACCTAGACAATGCAGTTCTGAAATATCAACTATAATGGAGAAGTTCTATCCCCATGTTAAATTGGGTTCAATACTTGCATCAATTGAGATCCAGCCTGGATATGGAGCTTCTCTGGTTGGTTTTCATATTACCAAGAGTGAATTTGTTAAAGAGAAACTTTTTTTATTGGTGGCACAGATAGATAACATTGAGATATCAGCATGCCTTATAAGTCCTCCGCAAGCGAATTTTCTCCTCAATGGAAAAGGAGTAGCCAATAGGACTTATGTTGAAATGGATCCTGGACCACAAATGCCAACTGACGTGACTGCTATGCTTAAATTTGGGACAAATCTTCTTCAAACTGTGGGCCAGTTCAATGGTCGTTACATTGTACTCGTTGCCTATATGAGTTTTACACCCTTGCATGAAGATCCAGTTCTTCAAGATTATCTCCAGCCTGCTGTTACCTCTACTGATTCTGATTCAGATATTGTTGAGGGGGCTTCACAGATTTCGCTAAATTGTCCAATAAGCTTTACACGTATTAAGACTCCTGTCAAAGGGCGATCATGCAAACATTTCCAGTGTTTTGACTTTAACAACTTCCTTAGTATCAATTCTAAAAGGCCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTCTGTTATGCTGATATTCGACTTGACCGAAACATGGTTGAGATCCTGAAAAATGTTGGTGAGAGCATTACGGAAGTGATTGTCCTTGCTGATGGATCTTGGAAGGCAGTCTTGGAAAAGGATCATGACGTGGATAAGATGCAAAAGAAGGCCCCCAACCATGAAAAGGAACAAACTGAACCACAAGAACATACTTGCTCTCCTGCAACTGTTGACCTCACAGAAGATGATGATCATGTGGAGGCAATGGACACTTCTGAAATTGTAGATAGAAAACCTCTCCAGGCATCTCTTCAAAGTCACTTTGTCGCTCCAAATTCAACTTCCTTTGGTATGAACACTCCTGGTGTCAATAGAAATGTTGCTGGTCAAATGGATGACTTTTTGTCTGGGGTTTATATTGCCCGTAGTAGGTCTGATACCCCAATGGTTGGTACCTTGGAGCTACCTGTTCTGCCCGATACTATTTCTCCAACATTTAATCAGGAATCTGCAGGTCGTGACAATAACTCTGCTGTTAACTCTGCCATGCGTAATCAAATTTCAGCACCAAATAATTTGCCGATGCAGATGAATCAAATGAACTCAGTTAACGAGTATGGTAGGTCGTCTTCGGTGCCAAGACATATTAATAGAATTCCAGTAGCTGTTCAGGCCCTCCCAGTCCAATCTCAGGCATCGGGAGATACTTTGAAAGCCATACTTAGTGATACTGAAAGACAGCAACGTTTTTCTCGAACCCCAATAAATCTGCCTCAGGTCTCAGGTGTGAATTCACCTGCATTTCGGCATCACAATGCAACACAGAATCGGGTACCATTACAGAACCCGCCAACATCAACTCAATTGCAGAACCCATACAGACCAAGTTCAATATCTGATTTTAGCAATCCACACCTGCAGCAATCTCTGAATCTTCTGCCATCTCGACAGCATTCAAATTTCCGACCATCTACTACCCCATGGTCTCACATCCAGCAAGGTGTTCCACAATCTGGGAATTTAAAGGCGGCAGGCATGGCTGCTCCACCGGCTGCCAGACAAGGTATTTCCAACGCTAGGAATGTTCCGCCAGCTGCTACCACTGCTCATAGCCAACAATCTAGGGGTTTGGCCGCTAATCAGCCTCCTAGATGGACACCACCACTAGTTCCGGTTCAAAATCAAAGCGGTGCTGCAGGCACACCTTTTGCAACTGACAGTTTCCAGGGAAGAGGAAACACAGCACATTCAGTCTCTAGGCCTGATGAATTATTCAGTACGCCACCAGAACAGAATTGGGCTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCCTTTCGACGAGTCTATTGCACAGCGAATAATTACTCCAACACAAACTCAAGGTTCAAGACCACCACCTCCACAACCTCTCCGACGAGCCACTGGGTCGACCCAACAGGATGTGCTCATTGCTAACAGAAATGCAAATACTCACAATCGTCCTTCCACTTGA 2535 0.4422 MNGAVGLPLPANSSPSVINMYRIQKVTERLGWLAQPGNRGDPKEFYNHCLSLSRGIDYALANGEIPTNAHELPLLVKKICQLKNDELSQAAMMVLMISVKGACEIGWFQTKESQELLTILDEIGKVFSSMGSINATPRQCSSEISTIMEKFYPHVKLGSILASIEIQPGYGASLVGFHITKSEFVKEKLFLLVAQIDNIEISACLISPPQANFLLNGKGVANRTYVEMDPGPQMPTDVTAMLKFGTNLLQTVGQFNGRYIVLVAYMSFTPLHEDPVLQDYLQPAVTSTDSDSDIVEGASQISLNCPISFTRIKTPVKGRSCKHFQCFDFNNFLSINSKRPSWRCPHCNQYVCYADIRLDRNMVEILKNVGESITEVIVLADGSWKAVLEKDHDVDKMQKKAPNHEKEQTEPQEHTCSPATVDLTEDDDHVEAMDTSEIVDRKPLQASLQSHFVAPNSTSFGMNTPGVNRNVAGQMDDFLSGVYIARSRSDTPMVGTLELPVLPDTISPTFNQESAGRDNNSAVNSAMRNQISAPNNLPMQMNQMNSVNEYGRSSSVPRHINRIPVAVQALPVQSQASGDTLKAILSDTERQQRFSRTPINLPQVSGVNSPAFRHHNATQNRVPLQNPPTSTQLQNPYRPSSISDFSNPHLQQSLNLLPSRQHSNFRPSTTPWSHIQQGVPQSGNLKAAGMAAPPAARQGISNARNVPPAATTAHSQQSRGLAANQPPRWTPPLVPVQNQSGAAGTPFATDSFQGRGNTAHSVSRPDELFSTPPEQNWAPTGRMRGSLDLSQPFDESIAQRIITPTQTQGSRPPPPQPLRRATGSTQQDVLIANRNANTHNRPST* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0256 844 ProSiteProfiles Zinc finger SP-RING-type profile. 290 371 IPR004181 GO:0008270
Vra11g0256 844 MobiDBLite consensus disorder prediction 592 611 - -
Vra11g0256 844 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 34 463 - -
Vra11g0256 844 MobiDBLite consensus disorder prediction 706 724 - -
Vra11g0256 844 MobiDBLite consensus disorder prediction 741 777 - -
Vra11g0256 844 MobiDBLite consensus disorder prediction 820 844 - -
Vra11g0256 844 MobiDBLite consensus disorder prediction 741 788 - -
Vra11g0256 844 Pfam MIZ/SP-RING zinc finger 301 349 IPR004181 GO:0008270
Vra11g0256 844 MobiDBLite consensus disorder prediction 706 725 - -
Vra11g0256 844 MobiDBLite consensus disorder prediction 396 412 - -
Vra11g0256 844 CDD SP-RING_PIAS_like 302 349 - -
Vra11g0256 844 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 386 IPR013083 -
Vra11g0256 844 SUPERFAMILY RING/U-box 301 376 - -
Vra11g0256 844 MobiDBLite consensus disorder prediction 619 648 - -
Vra11g0256 844 MobiDBLite consensus disorder prediction 396 420 - -
Vra11g0256 844 MobiDBLite consensus disorder prediction 801 844 - -
Vra11g0256 844 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 34 463 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0256 K04706 - gmx:100780539 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0256 11 1765299 1775384 Vra11g0256 11 1765299 1775384 ECH