Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0245 ATGCACTCTCTCTATGTGACAAGCACCTTCCTACGCTCGCATTCACTCTCTTCATTCGCCTCATCTTCTTTTCTTCTCCTTCTTCCTCCTTCCACTCTTCGCAGCTCTAAGAAGCTGCAATTCTCACCCTTCGCCACCTCTTCCCCAATTCCCCCAAATGAAACCAAATTCCCAACGCAGGGATTCTCTCATTCTTGCAAGAATTCCAACGATTCACTCGAATCACTTGCTCGAATCTCCAATTGGAAATTCCCCTTAGCTCCAATTGCTCATTCTAATTTATCCGTCAGGCTTCTCAAGTTTATGATGCTCTTCGGCTTCCTCACACTTAAACACTCTTATCCCGCTCATGCTGCCTCTGACTTTTCCAGTGCTTTCAGTTTATCTCCTGAATTTGGGGATTTTGATGACATAAGCACAGGTTTTGCTTCAGCGTTTCTGCTGATATTTTTCTCTGAACTGGGAGATAAAACCTTTTTCATTGCAGCCCTGCTTGCAGCTAGGAATACAGCTGGTGTTGTTTTTATTGGGACGTTTAGCGCACTTGCGGCAATGACTCTGATCTCTGTTGTCCTTGGGAGAACTTTTCATTATGTTGATGAAATCTTGCCATTCAGGTTTGGAGAAACAGATTTACCTATTGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTTGGGGTCTCTACCCTGCTGGATGCCTCATCTAGTGATGGCCAAAAATCAGATGAAGAGCAGAAGGAGGCAGAGCTAGCAGTTTCTGAATTTTCTGGAAATGGTGCTGGAATACTATCTGCTGCTAGCACAGCTGCCAGTACTTTTCTCTTAGTTTTTGTCGCCGAATGGGGTGATAAGTCATTTTTCTCCACAATTGCTCTTGCAGCAGCTTCTTCTCCCCTTGGAGTCATAGCTGGAGCACTGGCGGGTCATGGTGTTGCAACTTTGCTAGCTGTACTAGGGGGCTCTTTACTTGGGACGTATTTATCAGAGAAGGTTATTTCCTACATCGGAGGTGTTCTCTTTCTCGTCNTTGCTGCAGTAACCTTATTTGAAATTGTGCAATAG 1065 0.4451 MHSLYVTSTFLRSHSLSSFASSSFLLLLPPSTLRSSKKLQFSPFATSSPIPPNETKFPTQGFSHSCKNSNDSLESLARISNWKFPLAPIAHSNLSVRLLKFMMLFGFLTLKHSYPAHAASDFSSAFSLSPEFGDFDDISTGFASAFLLIFFSELGDKTFFIAALLAARNTAGVVFIGTFSALAAMTLISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDEEQKEAELAVSEFSGNGAGILSAASTAASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTYLSEKVISYIGGVLFLVXAAVTLFEIVQ* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0245 354 Pfam Uncharacterized protein family UPF0016 144 227 IPR001727 -
Vra11g0245 354 Pfam Uncharacterized protein family UPF0016 272 344 IPR001727 -
Vra11g0245 354 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 86 354 IPR001727 -
Vra11g0245 354 PANTHER PROTEIN PAM71, CHLOROPLASTIC 86 354 - -
Vra11g0245 354 ProSitePatterns Uncharacterized protein family UPF0016 signature. 153 162 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0245 Vra-Chr11 1667167 1672424 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0245 - - gmx:100809618 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0245 11 1667167 1672424 Vra11g0245 11 1667167 1672424 ECH