Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0240 ATGCGTAGCCGGGGATCGCAGAACCGGCTTTCTGGTAACTCTTTTGAATCACGTGTTTCTGCGCTCATGCTAGCCATGATTGCTACCATGGCTACCATTTACGTTGCCGCCAGGCTATTTCAGGAGGCGGAAAGTAGGGCTTATTTAATCGAAGAGCTGGAAAAAAGAACTGGTCAGGGTCAATCTGCCGTTTCTCTTGATGATACACTGAAAGTTATAGCCTGCAGGGAACAAAGTAAGAAGTTGTCTGTCCTTGAGACCGAACTAGCTGCGGCTAGACAGGAAGGTTTTGTTCCAAAGCGCTTGCAAGGAAATAATGAGAAGCATCCTACAAAGAAAGTACTTTTAGTAGTTGGAGTGATGACAACCTTTGGTCGGAGAAAAAACCGAGATGCAATCCGTAAGGCTTGGATGCCAGCAGGTATAGCTAGGAGAGAACTGGTTGATAAGAAAGGAATCGTTGTCCGATTTGTAATAGGAAGAAGTGCAAACGACGGAGACAGTTTGGACAAAGATATTAAAGCAGAAAGCAGTCACACCAATGATTTCGTCATTCTTGATAATCAAGTGGAGGCCCCTGAAGAAAAAGCAAAAAAGATAAAATCATTCTTCATTTATGCAGTAGGCAAATGGGATGCTGAATTTTATGCTAAGGTCGATGATGATGTCTATGTTAATCTCGATTCCCTTGGAGGAGTGCTAGCTTCTCATTTGGACAAGCCCCGTGTGTATATTGGTTGCATGAAATCAGGCAAAGTTTTCTCTGAGCAGACACATAAATGGCATGAGCCAGACTGGTGGAAATTTGGTGATGGAAAATCATACTTTAGACATGCTTCAGGTGAGGTCTATGTCATTTCAAAATCATTGGCTCAGTTTATTTCAATAAACAGTTTTATGCTCCGTACATATGTACATGATGATGTAAGCATTGGATCTTGGTTTATTGGGCTTGATGTACAGCACATTGATGAAACAAAACTTTGCTGCTCCACCTGGTCCCCTGGGGCAATTTGTGTGGTAGTATGA 1029 0.4257 MRSRGSQNRLSGNSFESRVSALMLAMIATMATIYVAARLFQEAESRAYLIEELEKRTGQGQSAVSLDDTLKVIACREQSKKLSVLETELAAARQEGFVPKRLQGNNEKHPTKKVLLVVGVMTTFGRRKNRDAIRKAWMPAGIARRELVDKKGIVVRFVIGRSANDGDSLDKDIKAESSHTNDFVILDNQVEAPEEKAKKIKSFFIYAVGKWDAEFYAKVDDDVYVNLDSLGGVLASHLDKPRVYIGCMKSGKVFSEQTHKWHEPDWWKFGDGKSYFRHASGEVYVISKSLAQFISINSFMLRTYVHDDVSIGSWFIGLDVQHIDETKLCCSTWSPGAICVVV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0240 342 Coils Coil 75 95 - -
Vra11g0240 342 Gene3D - 104 331 - -
Vra11g0240 342 PANTHER HEXOSYLTRANSFERASE 1 337 - -
Vra11g0240 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra11g0240 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0240 Vra-Chr11 1630037 1635080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0240 22 342 Glycosyltransferase AT5G53340 60.125 1.32e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0240 K20854 - gmx:100802753 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0240 11 1630037 1635080 Vra11g0240 11 1630037 1635080 ECH