Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0052 ATGGATCCGTGCCCCTTCGTGCGGATTCTCGTCGGAAACCTCGCCGTAAAGTCTCCGGCGTCGTCCAAACATTCTTCGTTCTCAGGCAAGGTGCATCCTTCAACTTCTTCCTTATTCTGCAAGATTCAACTGAAGGGAGTGGATTGTGAGGAATCCCTTTCAGGCAGCAACGTCTGCAGTGTTCCTCTGATAACGGAGTTGGACCCGCATCCTCGGTCACTGGCGGCATCCTTCGATTTCTCCAAACCTAAAATCATGAAAGCGTCAAAGAAAGCCCAAATAAAGATATTGGTGTACAAGGGGGCGGCCACTCCTTCCTGCATCTTCACCTCCGCCAAACTAATAGGCAAAATCTCCATCCCCCTCGATCTAACCCTCGCCGAATCACGCGCCTGCACTTTCCACAACGGTTGGCTCCCCCTTACCAAAACCACCAACCAGGTCCAGTTACTTCATTTAACTGTCCGGGCCGACCCGGACCCGCGCTTCGTCTTCCGCTTCGACGGCGAACCGGAGTGTAGCCCCCAGGTTTTCCAAATCAAAGGCGACGTCAAGCAACCCGTTTTCACTTGCAAGTTCAGCTTCAGGGACAAGAATCCCGCTCACTTCCCCTCGCCCAACGCTAACAGTACCGCCGAGCGAAAAGGATGGTCCATCACCGTTCACGACCTTTCCGGCTCGCCGGTCGCCGCCGCCTCCATGGCCACGCCCTTCGTCCCTTCCCCGGGTTCGCAGCGGGTCAGCCGCTCCAACCCCGGGGCCTGGCTCATAATCCGCCCCGACGGAGACGGCACGTGGAAGCCCTGGGGCCGCCTTGAGGCCTGGCGCGAGCCCAACAATTCCAACGCCGTGGGCTACCGATTTCAAATCCTCCCCGCCACCGCTGACCCAGTCACCCTCGCAGGGTCCACCATCAGCTCCCAACACGGCGGGAAATTCACCATCGACGCTACCTCCGGCGTCACTCCGTTGAACACTCCGCGCGGCAGCTGGGATCTCGGGTCTGGTTCCGGGTCCGGGTCCAGTTTAGATTTCGGATTTGAACCGAATTCGGTTTTTAACAAGGGGTTTGTGATGTCAGCGACAGTGGACGGTGAAGGAAAATGTAGCAAGCCCGAAGTGGAGGTTGGGGTACAGCATGTGACTTGCACAGAAGATGCTGCTGCTTTCGTTGCTCTCGCGGCGGCCCTGGATTTGAGTATGGACGCTTGCAAGCTGTTCTCCCACAAACTCCGGAAGGAGTTAAGGCAGTAG 1254 0.5726 MDPCPFVRILVGNLAVKSPASSKHSSFSGKVHPSTSSLFCKIQLKGVDCEESLSGSNVCSVPLITELDPHPRSLAASFDFSKPKIMKASKKAQIKILVYKGAATPSCIFTSAKLIGKISIPLDLTLAESRACTFHNGWLPLTKTTNQVQLLHLTVRADPDPRFVFRFDGEPECSPQVFQIKGDVKQPVFTCKFSFRDKNPAHFPSPNANSTAERKGWSITVHDLSGSPVAAASMATPFVPSPGSQRVSRSNPGAWLIIRPDGDGTWKPWGRLEAWREPNNSNAVGYRFQILPATADPVTLAGSTISSQHGGKFTIDATSGVTPLNTPRGSWDLGSGSGSGSSLDFGFEPNSVFNKGFVMSATVDGEGKCSKPEVEVGVQHVTCTEDAAAFVALAAALDLSMDACKLFSHKLRKELRQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0052 417 Pfam Protein of unknown function (DUF1005) 1 416 IPR010410 -
Vra11g0052 417 PANTHER F2J10.8 PROTEIN 1 417 - -
Vra11g0052 417 PANTHER OS08G0163500 PROTEIN 1 417 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0052 Vra-Chr11 401744 403634 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0052 - - gmx:100816033 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0052 11 401744 403634 Vra11g0052 11 401744 403634 ECH