Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0039 ATGAATGCATTCGCATCATCACAATGCAGCAGCGGGTGTGAGTCTGGTTGGACTCTATACCTGGAGCAATCTCTCCAGCTCAATCACAATGCCTTTTCACATGCAACTTCCCAGTTTCATGGTGAAGATAACCACGAATACAAAGCCAAGAAAGCCAAAAAGGAGGAGGCTGAGGAAGAGGACCTGTCCATGGTCTCTGATGCTTCTTCTGGGCCTCCACACTTGCCAGATGCACAAGATAATGGTAGCTTTTACTCTGCATCTAAGGCAGCAAAACTTGGCAAGAGAAGTAAGAAGAGGCAGAAGGTTAAGGAATACCCACACCTGCCTTCTTTTCTTGATGACACTGCTAGCTCTTCTGTCTTTGATTTCTCCATGAACAATGTCACAGTGACCAACCAACAAACTTCCACAGAGAGCATGCTAGAATACTCACAAGGTTTCTCTGCTACTTATTATGAGGAGAGATCCTCGTTGCAAGACCAGTTCGGCTTTTTAGAACCATCCCTATCAGAAAATGGAGTTGAAAACAACAAGCAAATGCTTCTTCTGTACAGTGGCCAATCTTCATGA 573 0.4468 MNAFASSQCSSGCESGWTLYLEQSLQLNHNAFSHATSQFHGEDNHEYKAKKAKKEEAEEEDLSMVSDASSGPPHLPDAQDNGSFYSASKAAKLGKRSKKRQKVKEYPHLPSFLDDTASSSVFDFSMNNVTVTNQQTSTESMLEYSQGFSATYYEERSSLQDQFGFLEPSLSENGVENNKQMLLLYSGQSS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0039 190 PANTHER - 1 179 - -
Vra11g0039 190 PANTHER OSJNBA0091C07.3 PROTEIN 1 179 IPR044670 GO:0009690|GO:0009691
Vra11g0039 190 Coils Coil 40 60 - -
Vra11g0039 190 MobiDBLite consensus disorder prediction 38 83 - -
Vra11g0039 190 MobiDBLite consensus disorder prediction 39 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0039 Vra-Chr11 315531 317459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0039 - - gmx:100818510 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0039 11 315531 317459 Vra11g0039 11 315531 317459 ECH
Vra11g0039 11 315531 317459 Vra8g2383 8 42004273 42005454 PCT