Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0027 ATGGGTGAAGAGGCCACCAAATCGAATCCGAAGCTAACCCTGTTGCCTCTCATAGCTCTGATATTCTATGAAGTATCAGGTGGTCCTTTTGGAGTAGAAGATTCCGTGAGGGGAGGGGGTGGTCCTCTTTTCGCGTTAATCGGATTCTTCGTTTTCCCTTTAATCTGGAGTATACCAGAAGCTCTTGTTACGGCTGAACTTGCCACCACCTTCCCTCAAAACGGTGGATATGTTATCTGGATTTCCTCAGCCTTTGGACCATTTTGGGGCTTTCAGGAAGGCTTTTGGAAATGGTTCAGCGGGGTCATGGACAATGCTCTTTACCCTGTTTTGTTCCTCGATTACATAAAGCAATCTTTGCCTCTCTTTGACCGATTCACTGCCCGAATCCCTGCTCTCTTAGTCATCACATTTTCACTAACTTACTTCAATTACCGTGGCCTTCACATTGTTGGCTTTTCTGCTGTTTTGCTTGCGCTGTTCTCACTTTCCCCATTTCTCATAATGGCCCTTCTTTCCATTCCATTAATAAGACCACGGCGGTGGCTTGCTGTAGATTTTGGCAAGGTGGAGTGGGGAAGATACTTCAATAGTATGTTCTGGAATTTAAACTACTGGGATAAGGCAAGTACCCTTGCAGGGGAGGTTGAAAATCCAAGCAAAACGTTCCCAAAAGCACTTTTTGGAGGACTAGTCTTGGTGGTTTCCTCATATTTGATCCCACTCCTTGCGGGAACAGGTGCTTTGGAGTCCTCGCCTAGTGAGTGGGCAGATGGCTATTTTGCACAGGTGGGGATGTTCATTGGTGGTTCTTGGCTCAAACTCTGGATTCAACTGGCTGCTGCTATGTCTAACCTCGGCTTGTTTGAAGCAGAAATGAGCAGTGATGCTTTTCAACTTCAAGGGATGAGCAAAATGGGAATGCTTCCAGCTGTATTTGCTTCAAGGTCTAAGTATGGAACGCCCACGGTTAGCATTTTGTTCTCTGCCACTGGAGTTATCTTCCTGTCGTGGATGAGCTTTCAGGAAATCATAGAGTCCCTCAATTTCTTATATGCCGTAGGAATGCTTCTCGAGTTTGCAGCTTTTATTACTTTGAGATTGAACAAGCCAAATCTTTACAGACCTTACAGAGTTCCGTTGCCAACATTTTGGGCGGCTATGTTATGTTTGCCTCCAGCTTTATTGCTTATTCTTGTAATGTGTTTGGCTTCTTCGAGAACTTTCTTTGTGGGTGGAGCTGTAATTCTTCTGGGGTTCATCCTGTACCCTATCTTAGTTCAATCCAAAAATAAAAACTGGATTCTGTTTGAAGAAGACTCAGCTACCTTGCATTCCTCTGGCTGGCAGCAATGCCACTCAGTTGTTTCAGAACAGACTGACCTCGACCAAGAAAATAAGGGTGTTGAGCTTGTCACCTCACCATTTGCTAGTGGGGAAGAAGAGTTGTGTTTAGTGCAAAGCGATTCGAAAGTCTAA 1479 0.449 MGEEATKSNPKLTLLPLIALIFYEVSGGPFGVEDSVRGGGGPLFALIGFFVFPLIWSIPEALVTAELATTFPQNGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYIKQSLPLFDRFTARIPALLVITFSLTYFNYRGLHIVGFSAVLLALFSLSPFLIMALLSIPLIRPRRWLAVDFGKVEWGRYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALFGGLVLVVSSYLIPLLAGTGALESSPSEWADGYFAQVGMFIGGSWLKLWIQLAAAMSNLGLFEAEMSSDAFQLQGMSKMGMLPAVFASRSKYGTPTVSILFSATGVIFLSWMSFQEIIESLNFLYAVGMLLEFAAFITLRLNKPNLYRPYRVPLPTFWAAMLCLPPALLLILVMCLASSRTFFVGGAVILLGFILYPILVQSKNKNWILFEEDSATLHSSGWQQCHSVVSEQTDLDQENKGVELVTSPFASGEEELCLVQSDSKV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0027 492 PIRSF AA_transporter 1 442 - -
Vra11g0027 492 PANTHER BNAA05G20530D PROTEIN 6 450 - -
Vra11g0027 492 Pfam Amino acid permease 15 399 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vra11g0027 492 Gene3D Amino acid/polyamine transporter I 9 448 - -
Vra11g0027 492 PANTHER POLYAMINE TRANSPORTER PUT1 6 450 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0027 Vra-Chr11 247303 249556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0027 1 466 Organic Solute Cotransporters AT3G19553 72.746 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0027 - - vun:114172952 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0027 11 247303 249556 Vra11g0027 11 247303 249556 ECH