Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0019 ATGGCGTTTTTGGAGTTTACAAGACTTGATGAAAGGTCAGTGATAGAGTACGTGAAGAGCGTCGCCGCCCTCTCCTCCTTGCTGAAGCTGGACGATGAGGACGCCGCCACCGAGAAGCTAACCGTGAAAGAGATCGGAGATGGTAACCTGAACTTTGTGTTCCTGGTGAGCAACTCTTCCCATTCCGTTATCATGAAGCAGTCTCTCCCTTACATTCGTTGCATCGGAGAATCATGGCCACTGACGAAAGACAGAGCATACTTTGAGGCCATGGCCCTGGAAGAACAGGGTCGCATCACCCCTCACCATGTCCCACAACTCTATCATTTTGACCCAACCATGTCCTTGATCGCCATGCGCTACCTTCCCCCTCCCCACATCATACTCAGGAAAGGCCTCATCGCTGGAATTCAGTATCCGCTCCTCGCACGCCACATCGCACACTTCATGGCAAACACTCTCTTCTTCACTTCTCTCCTTTTTCACTCCACACTCGATCACAAACGCCAAGTTGCAAAATTCTGTGGGAATTCCGCCTTATGTAGGCACACTGAGCAGGTTGTTTTCTCCGACCCTTATCAAATTTCTCAATACAACCACTGGACTTCTCCCTATCTTGATCCTGATGCCGAAGCTCTTCGTCACGACAATCTCCTCAAGCTTGAAATTGCTATCCTCAAATCTAAGTTCTCAGAGCAGGCCCAGGCACTCATTCATGGGGATCTGCACACTAGTTCTGTCATGGTTACTCTCGAATCAACTCAAATCATTGATCCAGAATTTGCATTTTATGGACCAATGGGTTATGACATCGGTGCTTTCTTGGGAAACTTGATGTTGGCTTTCTTTGCGCAGGATGGACTTGTTGATCAACCCGATCATAGAAAAGCATATAAGGAGTGGATTCTTGAGACAATCGAAGACACTTGGAATCTCTTCTACAAAAATTTCGTTGCACTTTGGGATGAACACAGAAATGGTGCTGGCGAGGCATATCTTCCAGCAGTTTATAACAATCCTGAGGTTCAACTCCTTGCGCAGAAGAGATACATGACAGAATTGTTTCATGACAGTCTTGGATTTGGTGCTGCCAAAATGATAAGGAGAATCGTAGGAGTTGCGCATGTTGAAGATTTTGAATCCATTACTGATGCTGCTAAACGGGCTTCCTGTGAACGGAAGGCTCTTAACTTGGCTAAGATGCTTCTCAAAGATAGAACAAAATTTGAAGGCATTTCTCAGATTGTTTCAGCAATTCGGCAATTTTAG 1269 0.4602 MAFLEFTRLDERSVIEYVKSVAALSSLLKLDDEDAATEKLTVKEIGDGNLNFVFLVSNSSHSVIMKQSLPYIRCIGESWPLTKDRAYFEAMALEEQGRITPHHVPQLYHFDPTMSLIAMRYLPPPHIILRKGLIAGIQYPLLARHIAHFMANTLFFTSLLFHSTLDHKRQVAKFCGNSALCRHTEQVVFSDPYQISQYNHWTSPYLDPDAEALRHDNLLKLEIAILKSKFSEQAQALIHGDLHTSSVMVTLESTQIIDPEFAFYGPMGYDIGAFLGNLMLAFFAQDGLVDQPDHRKAYKEWILETIEDTWNLFYKNFVALWDEHRNGAGEAYLPAVYNNPEVQLLAQKRYMTELFHDSLGFGAAKMIRRIVGVAHVEDFESITDAAKRASCERKALNLAKMLLKDRTKFEGISQIVSAIRQF* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0019 422 Gene3D - 126 422 - -
Vra11g0019 422 SUPERFAMILY Protein kinase-like (PK-like) 37 421 IPR011009 -
Vra11g0019 422 PIRSF MTRK 1 422 IPR009212 GO:0009086|GO:0046522
Vra11g0019 422 Pfam Phosphotransferase enzyme family 41 279 IPR002575 -
Vra11g0019 422 PANTHER METHYLTHIORIBOSE KINASE 3 421 - -
Vra11g0019 422 Gene3D Phosphorylase Kinase; domain 1 1 125 - -
Vra11g0019 422 TIGRFAM MTRK: S-methyl-5-thioribose kinase 43 417 IPR009212 GO:0009086|GO:0046522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0019 Vra-Chr11 196468 198351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0019 K00899 - gmx:100818359 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0019 11 196468 198351 Vra11g0019 11 196468 198351 ECH