Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0018 ATGAGATTGACGATGGCGGCACAAGCAGAATGGATGTTCAGAGCGTTGAGGAGTGGTCGGCGGCACTTGTCGGCGGGAAGGCAGCTGGAGGAGAAATGGCTTACGCTGCCTCCCGTGGCGGCGACTGCCACCGTGGAGGTGAATGGAAAGAGAAAGGGAAAGGGAAACCAACTCTCCTCCACTTCCACCACCGCGCTGAAATGGATTGTTCGCTGCTGCCCAAACCTCCCCATATCCCTTCTGCACAAGCTTTTCCGTCTGAGACAAGTTCGACTTCTCTCTCCCCCTCACATGGACATGCAACAGCAAACACTCAAAAGGGTGGCAGCTAAGTACACCTTGAACGCTGGAGATCGGATTTTACTGCCTCAATCTGTTCAACAAAAACCAACGCCTACGCACAAACCTCATTCTCCTCTCACTCCCCAACAAATCAACTTCATCCGCAAATTTGTTATATTCAAGGATCCTGCCATTCTCGTCCTCAACAAACCTCCGGGAATGCCTGTGCAGGGTGGCATTAATATCAAACACAGTTTAGATGCGGTAGCTGCTGCATGTTTAAATTATGAATACTCTGAACCCCCTCGTCTGGTGCATAGACTAGACAGAGACTGTTCTGGCCTACTGGTGATGGGAAGAACACAGACAAGTACCACAGTTCTGCATTCCATCTTTCGGGAGAAAACATCTAGGGCATTAGATGATATTGGCGAAGAGAAGAGAATACTACAAAGAAGGTATTGGGCACTTGTCCTTGGATGTCCTAGACGTTCAAAGGGGTTGGTCACTGCTTCACTGGGTAAGGTGGTAGTTGACAATGGGAAATCTGATCGAATAACTGTAGTTGACAATTCTGCATCATTGTCATCACAGCATGCAATTACAGAGTACCGAGTGATTGCATCATCATCACAAGGTTACACATGGTTGGAGTTGTCCCCTTTAACTGGTAGAAAACACCAGCTTCGAGTGCACTGTGCCGAGGTGTTAGGTACACCGATAGTTGGGGACTACAAGTATGGATGGCAGGCTCACAGGCAGTGGGGAGGTTTTGATTTGTCTAATGTGGAGGACTCATGTGAAGAGCTTTTCAAGGAAGAAACACTCCCCTTTGGCCTTAATTTGAACAATGGGAGCATCTCTGAGAACCATCCTCGTTTACATCTTCATTGCAAGCAAATAGTCTTACCCAATATATCTCAGGCACTGCAAAATGTGCAATCATTTTCCAATTGTGATCTTTCACAAGTGGAACGGCTTGAATTGGTCGCGGATTTGCCTCTATACATGCAAAGAAGTTGGGATGTCACAAATTGTTGA 1323 0.4717 MRLTMAAQAEWMFRALRSGRRHLSAGRQLEEKWLTLPPVAATATVEVNGKRKGKGNQLSSTSTTALKWIVRCCPNLPISLLHKLFRLRQVRLLSPPHMDMQQQTLKRVAAKYTLNAGDRILLPQSVQQKPTPTHKPHSPLTPQQINFIRKFVIFKDPAILVLNKPPGMPVQGGINIKHSLDAVAAACLNYEYSEPPRLVHRLDRDCSGLLVMGRTQTSTTVLHSIFREKTSRALDDIGEEKRILQRRYWALVLGCPRRSKGLVTASLGKVVVDNGKSDRITVVDNSASLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRQWGGFDLSNVEDSCEELFKEETLPFGLNLNNGSISENHPRLHLHCKQIVLPNISQALQNVQSFSNCDLSQVERLELVADLPLYMQRSWDVTNC* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0018 440 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 32 438 - -
Vra11g0018 440 CDD PseudoU_synth_RluA_like 159 345 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Vra11g0018 440 PANTHER RNA PSEUDOURIDINE SYNTHASE 3, MITOCHONDRIAL 32 438 - -
Vra11g0018 440 Pfam RNA pseudouridylate synthase 159 328 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Vra11g0018 440 Gene3D Pseudouridine synthase 146 409 - -
Vra11g0018 440 SUPERFAMILY Pseudouridine synthase 147 399 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0018 Vra-Chr11 189543 193855 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0018 - - vun:114170473 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0018 11 189543 193855 Vra11g0018 11 189543 193855 ECH