Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0749 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCAGGGATTGAATCACAAAAAAGGGGTTTCTGGTAGTGTGCTTCCGGGAATGAAGGGCCATGTTAAAGGAGGGCCGGTGAAGGTTTTCCCGAGAGAGGACCTCACTGACGGTGATAGCGGTGTTGCGCGGACTGCATGTGATTCCAGTTCTTCAAGTGATGACTTTAACAACGAACAAAAGTCTGAAAATGTTTCTCGGAAAGAGAAACAAGGGATGGCTGGAAAGCATGACCTGGAGGAGTCCTTGCCCTTTGAGAGAGATTCGAGGGATGACAGTTTGAATTCCGAAGATTCAGTACAAGAAGAAGAAAATGGGACTTTGCCTAGAAGTGATCAAGGTCTTCAGAGTATAAATAGTAGATTGAGCTGTATACTGGATAGTTTGCACCTGAAAAGTGTGGTGGATAAAGTAGACCTTGCCGATAATGTGATAATTAGAAGATTAAGGTTTTCACTGTTTTCCATGTTCACAGTAATTTCAGAGTGGCTAACCAGGCAGACTCCATTGTTTGTATCTCTTAGAACCATCATGTTTAAAGCCTATCATGATTTCAGAACGAAAGTTGTGCAGGCATATCCTGTTATTCTAAAGTGGCTCATGCATTTTGGAAATGTAGTGCTCCTATTATCAGTGTTTTGGTTGGATTGTGCACTTCGGGGTATTGATTCATTTGTACGAATGGGTACAACGTCCTTCTTCTCTGTTATATGGTGTAGCATATTTTCTGTGATTAGTATGATAGGGGTGCTCAAGTTTCTCGCTGTCGTGGGCCTGGCTGCTTTGATTGGATCTTTTCTTGGGCTTATGCTTGCAATTTTGACTGTTGCAATCATTGGAGTTATTATCTTGTGGTTTTATGGTAGCTTTTGGACAACGACATTTTTCATCATCCTAGGAGGATTGGCATTTATGTTTAGTCATGAACGGGTGGCACTACTTATCACCACAGTGTATTCTGTCTATTGTGCATGGCTGTATGTTGGGTGGCTTGGTTTACTGGTGGCTTTTAATTTAGCTTTTATCTCTAGTGATGTTCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAGCAAAGAGCTGGAATGTATGGTCAACCTGGATTCAGTGACGGATCAACACATGCTTCTTCCTCTGAAAATGGACCGGGACCATCGGCAGATCGCAGTGCTGGGATCCCTTCAACTAGTGGGGTTGATTCTGATGTAACTTCTGAAGATGAAGTAGTCCGTTTGTTGAACTGCTCTGATCACTATGCAGCACTGGGCTTGACGCGATATGAAAATATAGATGTTTCAATACTAAAGCGGGAATATAGGAAAAAGGCAATGTTGGTACATCCTGACAAAAATATGGGTAATGAAAAGGCTGCTGAAGCATTTAAGAAACTTCAAAATGCGTATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAGGAGCTATTGAGTGTATTTCGTAGATTTCATGACGCTTCTAATAAGAATGGTAGGCATGGATTCTTTCCTTCAGGATTTGCACGGTCTGATGCAGATGGCAAGGACCCATTTGGTGATTCAAGGCGAATAGCCTGCAAAAGGTGTGGTGGTTTTCATGTGTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCTAAGGATGGGGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTGGATGCTCCTTCAGCGTATGTGTGTGCTGGTAGCAGGATATACGATGCCACCGAATGGTATATCTGTCAGGGCATGAGATGTCCAGCGAACACTCATAAGCCAAGTTTCCATGTTAACACCAGTTTAATGTCCAAGAATAATTCTGGTAAAGGAACTAGTTCAGGTCAAAGAGGTGGGCGGATGCCAGCACCTAATATCGAAGAAACCATGACTGAGGAAGAATTCTTTGAATGGTTACAAAATGCAGTCCAGGCAGGTGCGTTTGACAATTTTAGTGGCACTGCAACAGAGAGTCCATCACCCAAATCTGGAAATGGGATGAAAAGTCCTAGTAGTAGTGGTGGCGGTGCTAGTGCTAGTGGCAGTAGCAGCAAGAGAAAGAAAAAGGGAAAAAAGCAATGGTGA 2220 0.4284 MARKGNQQKNGVDRQGLNHKKGVSGSVLPGMKGHVKGGPVKVFPREDLTDGDSGVARTACDSSSSSDDFNNEQKSENVSRKEKQGMAGKHDLEESLPFERDSRDDSLNSEDSVQEEENGTLPRSDQGLQSINSRLSCILDSLHLKSVVDKVDLADNVIIRRLRFSLFSMFTVISEWLTRQTPLFVSLRTIMFKAYHDFRTKVVQAYPVILKWLMHFGNVVLLLSVFWLDCALRGIDSFVRMGTTSFFSVIWCSIFSVISMIGVLKFLAVVGLAALIGSFLGLMLAILTVAIIGVIILWFYGSFWTTTFFIILGGLAFMFSHERVALLITTVYSVYCAWLYVGWLGLLVAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRAGMYGQPGFSDGSTHASSSENGPGPSADRSAGIPSTSGVDSDVTSEDEVVRLLNCSDHYAALGLTRYENIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHDASNKNGRHGFFPSGFARSDADGKDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAGSRIYDATEWYICQGMRCPANTHKPSFHVNTSLMSKNNSGKGTSSGQRGGRMPAPNIEETMTEEEFFEWLQNAVQAGAFDNFSGTATESPSPKSGNGMKSPSSSGGGASASGSSSKRKKKGKKQW* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0749 739 MobiDBLite consensus disorder prediction 113 127 - -
Vra10g0749 739 MobiDBLite consensus disorder prediction 56 72 - -
Vra10g0749 739 MobiDBLite consensus disorder prediction 694 739 - -
Vra10g0749 739 MobiDBLite consensus disorder prediction 73 109 - -
Vra10g0749 739 MobiDBLite consensus disorder prediction 643 669 - -
Vra10g0749 739 MobiDBLite consensus disorder prediction 643 664 - -
Vra10g0749 739 SMART dnaj_3 436 496 IPR001623 -
Vra10g0749 739 Gene3D DnaJ domain 425 516 IPR036869 -
Vra10g0749 739 SUPERFAMILY Chaperone J-domain 432 521 IPR036869 -
Vra10g0749 739 ProSiteProfiles dnaJ domain profile. 437 504 IPR001623 -
Vra10g0749 739 ProSitePatterns Nt-dnaJ domain signature. 481 500 IPR018253 -
Vra10g0749 739 MobiDBLite consensus disorder prediction 390 422 - -
Vra10g0749 739 CDD DnaJ 437 493 IPR001623 -
Vra10g0749 739 MobiDBLite consensus disorder prediction 1 127 - -
Vra10g0749 739 MobiDBLite consensus disorder prediction 694 728 - -
Vra10g0749 739 Pfam Cleavage inducing molecular chaperone 547 644 IPR032843 -
Vra10g0749 739 PRINTS DnaJ domain signature 459 474 IPR001623 -
Vra10g0749 739 PRINTS DnaJ domain signature 476 496 IPR001623 -
Vra10g0749 739 Pfam DnaJ domain 437 501 IPR001623 -
Vra10g0749 739 PANTHER OS03G0832900 PROTEIN 1 739 - -
Vra10g0749 739 PANTHER OS03G0832900 PROTEIN 1 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0749 Vra-Chr10 13582645 13588149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0749 1 704 Miscellaneous Gene Families AT5G49580 52.535 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0749 K09534 - gmx:100789594 1210.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0749 10 13582645 13588149 Vra10g0749 10 13582645 13588149 ECH