Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0748 ATGGATATGCGAGGAGATGGGATTTTCCCGGATGAGGTTGTCATTCAGATTCTTGCAAGGTTGCCTGTGAAGTCCCTTTTCAGGTTCAAAACCGTGTGCAAACTGTGGAATAGGTTGTCTTTGGATAAGTATTTTGTTCAACTCTACAATGAGGTTTCTAGGAAGAACCCCATGATTCTGGTCGAGGTTTCTGATTCGTATGGGTCCAAATCTAGCTTAATATGTGTTGATAATTTAAGGGGCGTGTCTGAATTTTCACTGAGTTTCTTGAATGATAGAGTTAAGGTTCGAGCATCTTGTAATGGCTTGCTGTGTTGCTCTAGTATTCCTGATAAGGGTGTCTTCTATGTCTGCAATCCGGTCACTCGCGAGTACCGGTTGCTTCCCAAGAGTAGGGAAAGGCCTGTGACTCGGTTTTATCCGGATGGTGAGGCTACCTTGGTTGGCTTGGCCTGTGATTCTTCTTATCAGAAGTTCAATGTTGTTCTGGCGGGTTACCATCGCACTTTTGGTCATAGGCCAGATGGGAGTTTCATATGTTTGGTGTTTAATTCTGAGTTGAACAAGTGGAGAAAGTTTGTCTCATTACAAGATGACCATTTCACTCACATGAATAAGAACCAGGTTGTTTTTATCAATAATGCTCTGCACTGGTTGACAGTTAGCTCTACTTATATACTTGTGCTTGATTTAAGTTGTGACGTTTGGAGGAAGATGCAACTACCTTATGACTTGATTTATGGAAATGGTTATAGGATTTATCTCTTGGACTTTGATGGCTGCTTGTCTGTTATTAAAATTTCAGAAGCATGGATGAATATATGGGTGCTAAAAGATTACTGGAAAGATGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTGCCAGGCATTTTCCCGATCAGTCAGACAGGTGAATATATTTTTTTGGCAACTCATAAGCAGATTTTGGTGTATCATTGCAAGAGTCAAGTTTGGAAAGAAATGTACTCTGTGAAGTATAGCTCTACACTCCCATTATGGTTTTCTGCTCATGCATATCGCAGCACAATGTTCTCATGCAACTGA 1083 0.4109 MDMRGDGIFPDEVVIQILARLPVKSLFRFKTVCKLWNRLSLDKYFVQLYNEVSRKNPMILVEVSDSYGSKSSLICVDNLRGVSEFSLSFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREYRLLPKSRERPVTRFYPDGEATLVGLACDSSYQKFNVVLAGYHRTFGHRPDGSFICLVFNSELNKWRKFVSLQDDHFTHMNKNQVVFINNALHWLTVSSTYILVLDLSCDVWRKMQLPYDLIYGNGYRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGEYIFLATHKQILVYHCKSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0748 360 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 358 - -
Vra10g0748 360 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 358 - -
Vra10g0748 360 SUPERFAMILY F-box domain 9 78 IPR036047 GO:0005515
Vra10g0748 360 Pfam F-box-like 10 43 IPR001810 GO:0005515
Vra10g0748 360 ProSiteProfiles F-box domain profile. 9 52 IPR001810 GO:0005515
Vra10g0748 360 TIGRFAM F_box_assoc_1: F-box protein interaction domain 99 328 IPR017451 -
Vra10g0748 360 Gene3D - 9 45 - -
Vra10g0748 360 SMART fbox_2 9 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0748 Vra-Chr10 13577494 13581313 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0748 - - gmx:100811223 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0748 10 13577494 13581313 Vra10g0748 10 13577494 13581313 ECH