Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0300 ATGGGTAGCAGCAGCAACGACTCCTCGTCGGATTTCTTCTACCGCCGGCACGTGTTCCTGTGCTACAAGAACCCCGCCGTGTGGCCACCGCGCATTGAGGCTGCAGAGTTTGATCGCTTGCCCAGACTGCTCCACGCGGCCATTAATGCAAGAAAGCCTCATATTAAGAAAGAGACCTGCTTAACAATATGTGAGGGGCATGATGGGACTGAAACATCAAATGGAGATGTGTTAATCTTTCCTGACATGATCAGATATAGGAGATTAACCCATTTTGATGTTGAGACATTTGTTGAAGAAGTTATTGTCAAGGAAGGAGAATGGCTTCCTGGAAATCCTGAATCCTTAAAAGCTTCATACGTTTTCGTCTGCTCTCATGGATCACGCGATCGTAGATGTGGGGTTTTTGGGCCTGTCTTGGTCAGTAGATTCAGGGAAGAGATAGGGTTACATGGACTCCAAGGCAACGTGTTGGTTAGCTCCTGCTCTCACATTGGGGGCAACAAGTATGCAGGAAATGTCATTATAATCGGATCGAGCATCAACGGCGAAGTCACGGGCCACTTGTATGGATATGTTACTCCAGATGATGTGCCTTTATTGTTTCGCCAGCATATCATTGCAGGGGAGATTTTTGACTCACTATGGAGGGGTCAAATAGGTTTATCAGAAGATGAACAGAAGAAAAAGCAAGAGCAAAGGCTTCAGCTGAATGGTGCAAGAAATTTAGAAGGAAGCACAGTGGCCGGCAGCAGCCGCTGTCAAACAGATGGAGAGAGCTGTTGCCAGGACAATGAAGACTCATGTTGCTGTCAGAATGATGTATTAGAGGAAAGTAGAGAGGTTTCAGGTGATCATAAGAGCAAGGAGAATCTGAATGTGCTTCGTCGGATCAACAAGGGCAAAGGAGTGTCTCACAAGTTCAGTTCCATGCCGACATGGCTTGACAGCTGGGAGCAAGAGGATACTTATGCTGCTCTTGCTGTTGTCTGTGCCGCGGTGTCGGTCGCCATAGCCTATAGCTGCTACAAGCAGTGA 1038 0.474 MGSSSNDSSSDFFYRRHVFLCYKNPAVWPPRIEAAEFDRLPRLLHAAINARKPHIKKETCLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVIVKEGEWLPGNPESLKASYVFVCSHGSRDRRCGVFGPVLVSRFREEIGLHGLQGNVLVSSCSHIGGNKYAGNVIIIGSSINGEVTGHLYGYVTPDDVPLLFRQHIIAGEIFDSLWRGQIGLSEDEQKKKQEQRLQLNGARNLEGSTVAGSSRCQTDGESCCQDNEDSCCCQNDVLEESREVSGDHKSKENLNVLRRINKGKGVSHKFSSMPTWLDSWEQEDTYAALAVVCAAVSVAIAYSCYKQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0300 345 Pfam Sucrase/ferredoxin-like 14 218 IPR009737 -
Vra10g0300 345 Gene3D Glutaredoxin 118 218 - -
Vra10g0300 345 CDD TRX_Fd_Sucrase 119 220 IPR009737 -
Vra10g0300 345 SUPERFAMILY Thioredoxin-like 120 222 IPR036249 -
Vra10g0300 345 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 13 345 IPR009737 -
Vra10g0300 345 PANTHER SUCRASE-LIKE PROTEIN 13 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0300 Vra-Chr10 7569442 7572918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0300 - - gmx:100788716 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0300 10 7569442 7572918 Vra6g0125 6 894640 897649 PCT