Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g05061 ATGGTTCTTTCTCAAAAGCTTCACGAAGCTTTCAAAGGCACTGTAGAGAGAATCACAGGCCCAAGAACCGTTTCCGCTTTCAAAGAAAAAGGAGTTCTTAGCGTCTCCGAATTCATCGTCGCCGGTGATAATCTCGTTGCTAAATGCCCCACTTGGTCATGGGAATCGGGTGAGCCAAGCAAGAGGAAGCCATATTTACCATCTGAGAAACAATTTTTGATTACTAGAAATGTCCCTTGTCTGCGGAGAGCTGCATCTATTGAAGAAGAATATGAAGCTGCCGGAGGGGAAGTTCTACTTGATGATGAAGAGAATGATGGATGGCTAGCAACTCATGGAAAACCTAAAGAAACTAAATCCGACGAAGATGAGAATTTACCTTCCATGGAAACTCTAGAAATCAGTGAAAAGAGTTCTATGAAGCCAATTTCTTCCTTCAAGGAAGGTGAGGACGATGAAGATATACCTGATATGGCAGAGTTTACAGAATATGACAACATTATTGAGACAGATCCGTCCACATATCTAGTAGCTCATGAACCTGATGATGATAATATTCTGCGTACGCGCACATATGACATCAGCATCTCGTATGATAAGTATTATCAAACACCTCGTGTGTGGCTTACCGGATATGATGAGTCAAGAATGCTATTGCAACCAGAACTTGTCCTTGAAGATGTTAGTCAAGACCATGCACGCAAAACGGTAACAATTGAGGACCACCCCCACTTGCCTGGAAAACATGCATCTATTCATCCTTGTCGTCATGGAGCAGTGATGAAGAAAATCATTGATGTTTTGATGTCACGCGGAGTTGAGCCTGAAGTTGACAAGTATCTGTTTTTATTCTTGAAATTTATGGCTTCGGTTATTCCAACAATCGAGTATGATTACACCATGGACTTTGATCTTGGAAGCTCCAGCAATTGA 933 0.418 MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIVAGDNLVAKCPTWSWESGEPSKRKPYLPSEKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDDEENDGWLATHGKPKETKSDEDENLPSMETLEISEKSSMKPISSFKEGEDDEDIPDMAEFTEYDNIIETDPSTYLVAHEPDDDNILRTRTYDISISYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g05061 310 Gene3D - 152 295 - -
Vivi7g05061 310 FunFam Autophagy-related protein 3 159 295 - -
Vivi7g05061 310 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 5 304 IPR046962 GO:0019776
Vivi7g05061 310 MobiDBLite consensus disorder prediction 107 130 - -
Vivi7g05061 310 Pfam Autophagocytosis associated protein, active-site domain 37 299 IPR007135 GO:0019787
Vivi7g05061 310 MobiDBLite consensus disorder prediction 107 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g05061 Vivi-Chr7 137066825 137071036 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g05061 K08343 - twl:119984566 578.17