Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04942 ATGCGGGTTGATTCACTTTTCTCATATCATTCCATCCCTTTTACTTTCTTGCTTCTCCTTTATCCAAAGATGGTGCTGAAAGGGAAACTTATTTCTGAACTTGGGATCAAAGCAGCCACTGACAAGTGCTTCAAATACTTGGCAACACAACTTCATGAATTGCAAAACCATTGTGAAAGAGTTCATCATACCAAGCTGCATGAAGGTGAAGACTGGCATGACACTGATAGAGTTAAGCACTGGACTTATGTCATAGATTGTTGCACATGTGGAGATTATCTTCGGCCTCTATCAATTGTGTTATGTGGCAAGGTACACACAAGTTATGACACTCTTGAAGAAATTGATGAGAAGAACAAAAAATTGCGTTATAATCTGTTCGGTGGAGATATTGGTGAGCATTATAAGGTGTTTAAACTCACCATTGAACTAATTGATAAGAGTGATGGCAGTGGTGCTATTAAATGGATAATTGATTTTGAGAAGATTAATGAGAATATTGACCCTCCTAATGGCTGGATGGACTACGTTACCAATGTTACTAAAGATCTTGATGCTCATCTTGTCAAGCCATAG 576 0.3819 MRVDSLFSYHSIPFTFLLLLYPKMVLKGKLISELGIKAATDKCFKYLATQLHELQNHCERVHHTKLHEGEDWHDTDRVKHWTYVIDCCTCGDYLRPLSIVLCGKVHTSYDTLEEIDEKNKKLRYNLFGGDIGEHYKVFKLTIELIDKSDGSGAIKWIIDFEKINENIDPPNGWMDYVTNVTKDLDAHLVKP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04942 191 Gene3D - 24 190 IPR023393 -
Vivi7g04942 191 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 24 190 - -
Vivi7g04942 191 SUPERFAMILY Bet v1-like 24 190 - -
Vivi7g04942 191 Pfam Pathogenesis-related protein Bet v 1 family 98 190 IPR000916 GO:0006952
Vivi7g04942 191 Pfam Pathogenesis-related protein Bet v 1 family 26 86 IPR000916 GO:0006952
Vivi7g04942 191 SMART Bet_v_1_2 25 191 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04942 Vivi-Chr7 129882318 129888842 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04942 - - vvo:131618543 408.297