Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04917 ATGAACGCATCTATAATCGATCCGTTGCAGGGAGATTTCCCTGAAGTGATAGAGGAGTATCTCGAACTGGAACATGGAATTATGAAATGTATTGCTTTCAACCGTCGCGGTACCCTTCTTGCTGCTGGCTGCAATGATGGAAGTTGTGTTATCTGGGATTTTTTAACCAGGGGCGTTGCTAAAGAGCTTCGAGATAGTGAATGTTCTTCTCCCATTACCAGTATTTGTTGGTCAAAGTGTGGTAATCGAATTCTTGTATCTGCTGCTGACAAATCGTTATCCCTGTGGGATGTTTTGAGTGGTAAGAGGATAAGAAGAATAGTTTTGCAGCAAACCCCTTTACAAGCCCGTCTTCATCCAGGCTCCTCCAAACTCTGCTTGGCTTGTCCTCTCTCATGTACTCCGATGATTATTGACTTAAACACCGAAGATACAACTTTTCTTAAAGTTTCTGTCTCTGAGAAATCAAGTGGACCAAACCCTGCCGCCCGCAATAAGACTTCCGATGGAAGTACCTCCTTCACACCTACTGCCGCGTGTTTTAGTAAGTATGGAAACTTGGTTTATGTGGGAAACTCTAAAGGGGAAATTCTTGTAATTGACAGTAAAGACGGTGAGGTGCGTGGCATGGTTCCCATCTCTGGTGGTTCTGTAGTGAAGAGCATTGTATTCAGCAGGAATGGACAGTATCTTCTAACGAACTCAAATGATAGAGTAATAAGGATCTATGAAAATCTTCTTCCTCCGAAAGATGAAGTTAGAGCACTAGATGAACTGAATAAGAACCTCAGTGATCTAAATGGTGTTGAGAAGTTGAAGGCCACAGGATCAAGATGTTTAACTTTATTTCGAGAGTTTCAAGATGCTATAACAAAGGTGCACTGGAAAGCACCCTGTTTCAGTGGTGATGGTGAGTGGGTTGTTGGTGGTTCTGCTAGCAAAGGAGAGCATAAGATTTACATATGGGATAGAGCCGGACATCTTGTGAAAATCCTTGAAGGGCCTAAGGAAGCCCTTATTGATTTAGCATGGCATCCTGTACGCCCTATTGTTGTATCTGTTTCTTTGAATGGCATAGTTTTTATCTGGGCTAAAGATTACACCGAGAACTGGAGTGCTTTTGCTCCTGATTTCAAAGAGCTCGAGGAAAATGAGGAGTACGTGGAGCGGGAAGATGAATTTGATTTGAATCCCGAGACTGAGAAGCCAAAAGGATCTGATGTCAATGAAAACGAGGAAGTTGACATTATGACAGTGGAGAAGGATCCTAATTTCAGCGACTCTGATATGTCCCAAGAAGAATTATGTTTCCTGCCAGTATCTCCCATACCCGATGTTCATGAACAGCAAGATAAGTTCTTAGAAAGTTCTTCAAAGGTGGTGGACAGCAATAACTCTGGATCCCCATTTTCAGAAGAGGCTGTTACAAATGAACATATGATGAATCATGCTTCAAGTCCAGTAGAAGATGATGCTATGGGAACACGGATTAAAAGAAAGCGGAAACCATCAGAGAAGGTGTTGGAGTTGCAGGCAGAAAAAGTCAAGAAACCTTTGAAATCTAGCAAATCATCGAGAACCAAAACAAAATCTTTGGTTGATGAGAATGCTGATAATGATTTTTATTATGACGAGCTTTCTGATGAATAG 1650 0.4182 MNASIIDPLQGDFPEVIEEYLELEHGIMKCIAFNRRGTLLAAGCNDGSCVIWDFLTRGVAKELRDSECSSPITSICWSKCGNRILVSAADKSLSLWDVLSGKRIRRIVLQQTPLQARLHPGSSKLCLACPLSCTPMIIDLNTEDTTFLKVSVSEKSSGPNPAARNKTSDGSTSFTPTAACFSKYGNLVYVGNSKGEILVIDSKDGEVRGMVPISGGSVVKSIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEVRALDELNKNLSDLNGVEKLKATGSRCLTLFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVFIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLNPETEKPKGSDVNENEEVDIMTVEKDPNFSDSDMSQEELCFLPVSPIPDVHEQQDKFLESSSKVVDSNNSGSPFSEEAVTNEHMMNHASSPVEDDAMGTRIKRKRKPSEKVLELQAEKVKKPLKSSKSSRTKTKSLVDENADNDFYYDELSDE 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04917 549 Gene3D - 267 380 IPR015943 GO:0005515
Vivi7g04917 549 SMART WD40_4 325 364 IPR001680 GO:0005515
Vivi7g04917 549 SMART WD40_4 14 53 IPR001680 GO:0005515
Vivi7g04917 549 SMART WD40_4 161 201 IPR001680 GO:0005515
Vivi7g04917 549 SMART WD40_4 56 97 IPR001680 GO:0005515
Vivi7g04917 549 SMART WD40_4 204 244 IPR001680 GO:0005515
Vivi7g04917 549 SMART WD40_4 276 323 IPR001680 GO:0005515
Vivi7g04917 549 SUPERFAMILY WD40 repeat-like 24 363 IPR036322 GO:0005515
Vivi7g04917 549 MobiDBLite consensus disorder prediction 456 483 - -
Vivi7g04917 549 ProSiteProfiles Trp-Asp (WD) repeats profile. 69 106 IPR001680 GO:0005515
Vivi7g04917 549 Gene3D - 18 266 IPR015943 GO:0005515
Vivi7g04917 549 MobiDBLite consensus disorder prediction 153 172 - -
Vivi7g04917 549 ProSiteProfiles Trp-Asp (WD) repeats profile. 21 53 IPR001680 GO:0005515
Vivi7g04917 549 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 4 509 IPR037850 GO:0048188
Vivi7g04917 549 FunFam Compass component swd1 163 423 - -
Vivi7g04917 549 Pfam WD domain, G-beta repeat 25 53 IPR001680 GO:0005515
Vivi7g04917 549 Pfam WD domain, G-beta repeat 288 323 IPR001680 GO:0005515
Vivi7g04917 549 Pfam WD domain, G-beta repeat 70 97 IPR001680 GO:0005515
Vivi7g04917 549 MobiDBLite consensus disorder prediction 455 549 - -
Vivi7g04917 549 MobiDBLite consensus disorder prediction 389 412 - -
Vivi7g04917 549 MobiDBLite consensus disorder prediction 492 520 - -
Vivi7g04917 549 MobiDBLite consensus disorder prediction 395 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04917 Vivi-Chr7 128133667 128138163 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04917 K14961 - gmx:100786748 891.338