Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04643 ATGTTAAAAGGTTATTGTAGTAGTAGCTCCTTCTACACAATATCTAATTTACACCTTCTCCCCTCAAACTTCAATACCAGATTTTGCAATCTTCATCAAGCAGCTGCAAAACTTGATCTTCCCCTCCAGATGAGCAGCTCAGCAGTTGTCAAAATTAGGACATCCATTGAGGATGTACGTAGTTTGCGATTTATTACAGCGGTTAAGACTCCGTATCTACCTCATGGAAAAATTGATCTGGAAGCATATGATAACTTGGTGAATATACAAATTGCGAATGGCGTTGAAGGTATTCTTGTTGCTGGCTCAACTGGTGAAGGCCAATTAATGACATGGGATGAACAGATAATGCTCATTGCTCATACGGTAAACTGTTTCGGCGACAAAGTTAAAGTTATTGGTAATGCAGGAAGTAATTGTACGAAAGAAGCGATTGAGGCCACCGAGCGAGGTTTTGCGGTTGGAATGGATGCTGCACTTCATATAAACCCTTACTATGGAAAAACCTCAATGGAAGGTTTGGTTGCTCATTATGATAGTTTGCTTTCTATAGGACCTGTCATTATATATAATGTACCTTCAAGGAGTAGTCAAGATATTCCTCCTAATGTGGTTGAAATATTGGCTAAAAACCCTAATTTTGTTGGTGTGAAAGAGTGTGTGGGAAATGAGAGGGTGAAGATGTATACTGATAAAGGAATTGTTGTGTGGAGTGTTGATATGTTGTGCCATGAAGCTAGATGGGATTGTGGTGCTGTTGGAGTTCAATCTGTTGCAAGTAATTTGGTTCCTGGTTTAATGAGAGAACTCATGTTTGAGGGTAAGAATTCTATATTGAATTCAAAGCTTATGCCTCTGTTTGATTGGCTTGTTATAGAGCCAAGTCCTATTGCTTTGAACACTGCTCTTGCTCAACTTGGAGTTGTCAAACCTGTTTTTAGGTTGCCATATGTACCTCTGAATAGGGAACAAAGGGTTGAGTTTGTGAATTTGGTGAAGGAAATGGGTAGGGAGAATTTTGTTGGAGATAGAGATGTTCAAGTTCTTGAGGATGATGATTTTATCATAGTAAGTCGGTATTAG 1083 0.3906 MLKGYCSSSSFYTISNLHLLPSNFNTRFCNLHQAAAKLDLPLQMSSSAVVKIRTSIEDVRSLRFITAVKTPYLPHGKIDLEAYDNLVNIQIANGVEGILVAGSTGEGQLMTWDEQIMLIAHTVNCFGDKVKVIGNAGSNCTKEAIEATERGFAVGMDAALHINPYYGKTSMEGLVAHYDSLLSIGPVIIYNVPSRSSQDIPPNVVEILAKNPNFVGVKECVGNERVKMYTDKGIVVWSVDMLCHEARWDCGAVGVQSVASNLVPGLMRELMFEGKNSILNSKLMPLFDWLVIEPSPIALNTALAQLGVVKPVFRLPYVPLNREQRVEFVNLVKEMGRENFVGDRDVQVLEDDDFIIVSRY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04643 360 Gene3D Aldolase class I 55 360 IPR013785 -
Vivi7g04643 360 ProSitePatterns Dihydrodipicolinate synthase signature 1. 97 114 IPR020624 GO:0016829
Vivi7g04643 360 SUPERFAMILY Aldolase 65 336 - -
Vivi7g04643 360 ProSitePatterns Dihydrodipicolinate synthase signature 2. 190 220 IPR020625 GO:0016829
Vivi7g04643 360 CDD DHDPS 63 332 IPR005263 GO:0008840|GO:0009089
Vivi7g04643 360 Pfam Dihydrodipicolinate synthetase family 63 334 IPR002220 GO:0016829
Vivi7g04643 360 PRINTS Dihydrodipicolinate synthase signature 94 115 IPR002220 GO:0016829
Vivi7g04643 360 PRINTS Dihydrodipicolinate synthase signature 185 202 IPR002220 GO:0016829
Vivi7g04643 360 PRINTS Dihydrodipicolinate synthase signature 130 148 IPR002220 GO:0016829
Vivi7g04643 360 PRINTS Dihydrodipicolinate synthase signature 162 178 IPR002220 GO:0016829
Vivi7g04643 360 SMART DHDPS_2 61 336 IPR002220 GO:0016829
Vivi7g04643 360 PANTHER DIHYDRODIPICOLINATE SYNTHASE 44 343 IPR002220 GO:0016829
Vivi7g04643 360 NCBIfam 4-hydroxy-tetrahydrodipicolinate synthase 65 333 IPR005263 GO:0008840|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04643 Vivi-Chr7 118248473 118250570 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04643 K01714 - gmx:100806626 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04643 7 118248473 118250570 Vivi7g04643 7 118248473 118250570 ECH