Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04612 ATGGCGAATCAAAACAACACTCTCCCAAAAGTATTCCTCCACGGTCCTCCCAACATCTCCATCACACTCCTCCCTCCCAATCCTTCTCACAATTTCCATATCCTAAACCCTTCTTCAATTCTCCCTCTCCAACACTTCATATCCACCAATCCCCACCACGCCTCCTCCATCGCCGCAATCGTCACTCTCAGTCTCCACCCCATAAATGCCGATGACATCCGACTTCTTCCCTCTCTCCGTTTCATCTGCACCCCCAGCGCCGGAACTAATCATATTGACCTCTCCGAGTGTCGCCGCCGGGGAATCCAGGTCGCCGACGCCGGAAATGTTTTCTCACCGGATGTTGCTGATATGGCAGTCGCTTTGTTGATTGATGTTTGCAGGAAAATCTCCGCGGCGGATCGATGGTTGAGACGACAGCTTCAGCCTTCCTCTTGGGATTTTCCACTTGGTTCTAAGTTGACAGGACAAAAAATTGGAATTGTTGGTTTGGGAAGAATTGGATCAGAAGTAGCAAAGAGGCTTGAGGGATTCAGTTGCAATATATCATACAATTCTAAGAACAGAAAACCGTTAGTTTCATACCCTTACTATTCAAGTGTGTTAGAGCTTGCAACTAACACCAATGTACTTATTTTGTGTTGTGAACTAAATGACCAAACAAGACACATTGTGAACAAACAAGTCATGTTGGCATTGGGAAAAGGGGGAATTATAGTGAATGTTGGACGAGGTGGTCTCATTGATGAAAAGGAATTGTTGAGGTGTTTGATTGAAGGTGAGATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAGGAGTTCTTTTCTTTGGATAATGTTGTTCTTTCACCACATGCAGGTGTATTAACTTCAGAGTCTTTCAATGGTATCAGCCAAGTTGTGGAACAAAATTTGGAAGCTTTCTTTTCGAATAAGCCTCTGATTACTCCAGTTATATAG 978 0.4427 MANQNNTLPKVFLHGPPNISITLLPPNPSHNFHILNPSSILPLQHFISTNPHHASSIAAIVTLSLHPINADDIRLLPSLRFICTPSAGTNHIDLSECRRRGIQVADAGNVFSPDVADMAVALLIDVCRKISAADRWLRRQLQPSSWDFPLGSKLTGQKIGIVGLGRIGSEVAKRLEGFSCNISYNSKNRKPLVSYPYYSSVLELATNTNVLILCCELNDQTRHIVNKQVMLALGKGGIIVNVGRGGLIDEKELLRCLIEGEIGGAGLDVFENEPHVPKEFFSLDNVVLSPHAGVLTSESFNGISQVVEQNLEAFFSNKPLITPVI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04612 325 FunFam Putative 2-hydroxyacid dehydrogenase 112 296 - -
Vivi7g04612 325 Gene3D - 52 319 - -
Vivi7g04612 325 CDD HPPR 51 316 - -
Vivi7g04612 325 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 54 324 IPR006139 GO:0016616|GO:0051287
Vivi7g04612 325 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 52 139 - -
Vivi7g04612 325 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 293 IPR006140 GO:0051287
Vivi7g04612 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 293 IPR036291 -
Vivi7g04612 325 Gene3D - 112 296 - -
Vivi7g04612 325 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 10 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04612 Vivi-Chr7 117872872 117874598 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04612 K15919 - gmx:100777313 422.935