Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04611 ATGGCAAATCAAAACGTCAACACCAGCACCATCACCAGTAGCATTCAACAATCCCAAAACAATCTCCCAAAAATATTCATTCATGGTCCTCCAGAATTCTCCTCAATCCTCAAACCAAATCCTTCTCACAACTTCCACATCGTAAACCCTTCTTCCCTCCCCCCTCTCCACCAATTCATAGCCACCAATCCTCACCAAGCTTCCTCCATCCACGCCATTGTTTGTACCACTCTCTTCCCCGTCAATGCTGATGTTCTCGATCTTCTCCCATCCCTCCGTCTCGTATGCGCGTCAAGCGCCGGAACTAATCACATTGATCTCTCTGAGTGTCAGCGTCGGGGGATCCAGGTCAGCGGTGCTGGAAATATTTTCTCAGAGGATGTTGCTGATATGGCTGTGGCGTTGTTGATTGACGTGAGTAGGAAAATTTCTGCGGCGGATCGGTTCTTGAGACGACATCTTCAGCATGCATCTTGGGATTTTCCACTTGGTTCTAAGTTAACAGGAAAAAAGATTGGAATTGTTGGTATGGGAAGAATTGGGTCAGAAGTAGCAAAGAGGCTTGAAGGATTCAGTTGCAAGATATCATACAACTCTAGGAACAAAAAGCCATTACTTTCATACCCTTACTATTCAACTGTGTTAGAACTTGCAACTAACACCAATGTACTTATTCTCTGTTGTGAACTAAATGACCAAACAAGGCACATTGTGAACAAACAAGTCATGTTGGCATTGGGAAAAGGAGGTATTATTGTGAATGTTGGAAGAGGATCTCTCATTGATGAGAAGGAATTGTTAAGGTGTTTGATTGAAGATGAGATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAGGAGTTCTTTTTTTTGGATAATGTTGTTCTTTCACCACATGCAGGTGTCTTAACTTCGGAGTCTTTCAATGGTATCAGCAAAGTTGTGGAACAAAATTTGGAAGCTTTCTTTTCAAATAGGCCTTTGATTACTCCAGTTATATAG 1017 0.4248 MANQNVNTSTITSSIQQSQNNLPKIFIHGPPEFSSILKPNPSHNFHIVNPSSLPPLHQFIATNPHQASSIHAIVCTTLFPVNADVLDLLPSLRLVCASSAGTNHIDLSECQRRGIQVSGAGNIFSEDVADMAVALLIDVSRKISAADRFLRRHLQHASWDFPLGSKLTGKKIGIVGMGRIGSEVAKRLEGFSCKISYNSRNKKPLLSYPYYSTVLELATNTNVLILCCELNDQTRHIVNKQVMLALGKGGIIVNVGRGSLIDEKELLRCLIEDEIGGAGLDVFENEPHVPKEFFFLDNVVLSPHAGVLTSESFNGISKVVEQNLEAFFSNRPLITPVI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04611 338 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 66 337 IPR006139 GO:0016616|GO:0051287
Vivi7g04611 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 125 306 IPR036291 -
Vivi7g04611 338 Gene3D - 125 309 - -
Vivi7g04611 338 FunFam Putative 2-hydroxyacid dehydrogenase 125 309 - -
Vivi7g04611 338 Gene3D - 65 332 - -
Vivi7g04611 338 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 133 306 IPR006140 GO:0051287
Vivi7g04611 338 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 65 152 - -
Vivi7g04611 338 CDD HPPR 23 329 - -
Vivi7g04611 338 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 43 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04611 Vivi-Chr7 117859011 117860411 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04611 K15919 - gmx:100777313 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04611 7 117859011 117860411 Vivi7g04611 7 117859011 117860411 ECH