Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04610 ATGAAAACTCCAATGGCAGATGAAAACAACAAGAACCTCCCAAAAGTATTCCTTCACGTTCCACCTGAATTCTCCTTCATTCTCCAACCCAAACCTTCACAAAACTTCAAAATCTTAAACCCCGGCTGCCTTCCCTCTCTCCCCCAATTCATTGCCACCAATCCCCACCACGCCACCTCCATAGTTGCAATTGTCTGTAGCCATGTCTCCCCCGTCACTGCTGACCTCCTCCAACTTCTCCCCTCCCTCCGTCTCATCTGCGCCCCTAGCGCAGGGACTGATCACATTGATCTCTCCGAGTGTCGCCGTCGGGATATCCAGGTCGCCGGTATCGGGAATCTTTTCACCGACGATGTTGCTGATATGGCTGTGGGTTTGTTGATTGACGTCAGCAGGAAAATTACCGCCGCTGATCGCTTCTTGAGAGGACAGTTTCAATCTTCCTCTTCAGATTTTCCACTTGGTTCTAAGTTGACAGGAAAAAAGATTGGAATTGTTGGTATGGGAAAAATTGGGTCAGAAGTAGCAAAGAGGCTAGAAGCATTCAACTGCAAGATATCATACAACTCTAGGAACAAAAAGCCATTACTTTCATACCCTTTCTATTCAACTGTCTTAGAGCTTGCAACAAACCATAATATACTTATTCTGTGTTGTGCACTAAATGACCAAACAAGACACATTGTGGACAAACAAGTCATGTCGGCGTTGGGAAAAGAGGGAATTATAGTGAATGTTGGAAGAGGTGGTCTCATTGATGAGAAGGAATTGTTAAGGTGTTTGATTGAAGGTGAGATTGGTGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAGGAGTTCTTTTCTTTGGATAATGTTGTTCTTTCACCGCATGCAGCTGTCTTAACTTCGGAGTCTTTCTATGGTATGAGCAAAGTTGTGGAGCAGAATTTGAAAGCCTTCTTTTCAAATAAGCCTCTGATTACTCCAGTTATATCGCTCGATTGA 999 0.4424 MKTPMADENNKNLPKVFLHVPPEFSFILQPKPSQNFKILNPGCLPSLPQFIATNPHHATSIVAIVCSHVSPVTADLLQLLPSLRLICAPSAGTDHIDLSECRRRDIQVAGIGNLFTDDVADMAVGLLIDVSRKITAADRFLRGQFQSSSSDFPLGSKLTGKKIGIVGMGKIGSEVAKRLEAFNCKISYNSRNKKPLLSYPFYSTVLELATNHNILILCCALNDQTRHIVDKQVMSALGKEGIIVNVGRGGLIDEKELLRCLIEGEIGGAGLDVFENEPHVPKEFFSLDNVVLSPHAAVLTSESFYGMSKVVEQNLKAFFSNKPLITPVISLD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04610 332 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 62 328 IPR006139 GO:0016616|GO:0051287
Vivi7g04610 332 CDD HPPR 14 320 - -
Vivi7g04610 332 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 57 143 - -
Vivi7g04610 332 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 30 324 - -
Vivi7g04610 332 FunFam Putative 2-hydroxyacid dehydrogenase 116 300 - -
Vivi7g04610 332 Gene3D - 116 300 - -
Vivi7g04610 332 Gene3D - 56 323 - -
Vivi7g04610 332 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 124 297 IPR006140 GO:0051287
Vivi7g04610 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 116 297 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04610 Vivi-Chr7 117846115 117847434 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04610 K15919 - gmx:100777313 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04610 7 117846115 117847434 Vivi7g04610 7 117846115 117847434 ECH