Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04608 ATGGCGAAAGACCTTCCAAAAGTGCTTGTTCTCGGTCCACCAACCTGCTTCTCAACATTCGAACAACTTTACTCACACAAGTTCAATCTCTTGAACCCCAAACCCTCAGGACTTCCCTTGCAACAATTCATGCTCGCCAATCACCACAACCCATCAACAATTTCCGCAATATTCTGTAGCGCCTTATATCGCATTTCCGTCGACGTCCTCAGCCTCCTCCCGTCCCTCCGTCTCGTTGTCAGCTCTAGCGCTGGAACAGACCACATCAACCTTCACGAGTGCCGTCGTCGTGGAATTCAGGTTGCCGGAGCTGGAGGGGTTTTCTCGGAAGATGTGGCTGATGCAGCAGTGGCGTTGCTTATTGATGTAATGAGAAAAATAACTGCAGCTGATAGATATTTGAGAATGCGGCAAAACAATTCTGACCCTTGGAATTTCACACTTGGCCACCGGTTATCAGGCAAGCGAGTAGGCATTGTTGGATTGGGAAATATTGGCATGGAAGTGGCAAAGAGATTGGAGTCATTTAATTGCTTCATCATGTACAATTCAAAGCATAAAAAACAATCAATTTCTTACCCTTTCTATTCCAATGTTGTTGATCTTGCAACTTCTAGCGACGCTCTTGTGGTGTGTTGCGCACTAAATAACCAAACACGACACATAATAAACAGGGATGTTCTTTTGGCATTAGGAAAAGAAGGGTTTATTGTCAATGTTGGACGAGGTGGTCTCATTGATGAAAAGGAATTGTTGAGGTGTTTGATTGAAGGTGAGATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAGGAGTTCTTTTCTTTGGATAATGTTGTTTTATCACCACATTCAGGTGCTTTTACTGTTGAAGCTACATTGAAATTGTGTGAAGTTGTGGCAGAGAACTTAGAAGCTTTTTTTCTAAATAAGGCATTAATTACACCAGTGATGTTGGGTCCACCTCGCGTCACCAAAAAGGATATTGGAGCCACCTTTTCGAGATTCCACATTAACTGA 1035 0.4338 MAKDLPKVLVLGPPTCFSTFEQLYSHKFNLLNPKPSGLPLQQFMLANHHNPSTISAIFCSALYRISVDVLSLLPSLRLVVSSSAGTDHINLHECRRRGIQVAGAGGVFSEDVADAAVALLIDVMRKITAADRYLRMRQNNSDPWNFTLGHRLSGKRVGIVGLGNIGMEVAKRLESFNCFIMYNSKHKKQSISYPFYSNVVDLATSSDALVVCCALNNQTRHIINRDVLLALGKEGFIVNVGRGGLIDEKELLRCLIEGEIGGAGLDVFENEPHVPKEFFSLDNVVLSPHSGAFTVEATLKLCEVVAENLEAFFLNKALITPVMLGPPRVTKKDIGATFSRFHIN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04608 344 Gene3D - 109 294 - -
Vivi7g04608 344 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 291 IPR006140 GO:0051287
Vivi7g04608 344 CDD HPPR 6 313 - -
Vivi7g04608 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 292 IPR036291 -
Vivi7g04608 344 Gene3D - 45 316 - -
Vivi7g04608 344 FunFam Putative 2-hydroxyacid dehydrogenase 109 294 - -
Vivi7g04608 344 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 5 318 - -
Vivi7g04608 344 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 56 322 IPR006139 GO:0016616|GO:0051287
Vivi7g04608 344 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 50 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04608 Vivi-Chr7 117821362 117823624 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04608 K15919 - gmx:100776772 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04608 7 117821362 117823624 Vivi7g04608 7 117821362 117823624 ECH