Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04576 ATGGCGGACCACACCGCCCTCACCTCTCCGTTACTCCCCTCCGACCACCTAATCCTCACCGTCGACTCCGATTCCAGCTCCGCCTCATCCACAGCCACAGCCACCGTCTCCCCAATCTCCAACCCCTTCGCCACCTTAGGTTTCAGCGGCGGGGAGTTGACTGTGCCGCCGGGGATTACGGTGGACCCGTTCCAGAACAATAAAGCGGGGATTAACGGTGTTTATGAATGGGTGAAGACGATTGTGTGTATTCCTTTGGCTTTGGTGCGGTTGGTGATATTTGGATTGTGTTTGGCGATAGGGTATGTGGCTACTAAGTTGGCACTTTATCGTTGGAGAGATAAGGAAAATCCTATGCCTAGGTGGAGGAGTGGAATTATGTGGGTCACGAGAATCGCCGCCAGATTCATATTGTTCTCTTTTGGCTATCATTGGATAAAACGGAAAGGAAAACCTGCCCCAAGGGAAGTTGCTCCAATAATTGTATCTAATCATGTATCTTATATTGAGCCTATCTTCTATTTCTATGAATTATTTGCCACCATTGTGGCATCCGAGTCTCATGACTCCATACCTTTTGTTGGCACAATCATTAGAGCAATGCAGGTCATTTATGTTAATAGGTTCTCACCATCATCAAGGAAGCAGGCTGTAAGAGAAATAAAGAGAAGGGCTTCTTGCGATAGATTTCCTCGAGTACTTTTATTTCCCGAGGGAACGACTACAAACGGCCGGAACCTCATTTCCTTCCAACTCGGTGCATTTATCCCCGGGTATCCAATCCAGCCTATAATTGTGCGCTATCCTCATGTGCACTTTGATCAATCTTGGGGTAATGTTTCTTTGGGACAACTTATGTTCAGGATGTTCACTCAATTCCACAATTTCTTCGAGGTAGAATATCTTCCTGTCATTTCACCCCTAGATGATAAGGAAACCGCTGTGCATTTTCGTAAAAGGACTAGCCATGCTATTGCAACTGCATTGAATACTGTCCAAACTGGACATTCTTATGGAGATATAATGCTTCATATGAGAGCACAAGAAGCAAAACAGGAGAACCCATCGGGTTTTATGGTTGAAATGGCCAAAGTGGAATCATTATTTCATATCAGCAGCTTGGAAGCTGTGGACTTTTTGGATAAATTCTTGGCTATGAATCCCGATCCCAGTGGTCATGTTCAATATCGTGGCTTTTTGAGCGTTTTAAGACTCAGGGCTTGTCCTCTTGCTGAAAAGATATTTGCATTCATTGATGTGGAGAAGTGTGGGAAAATTACATTCAAACAGTTCTTGTATGGTTCTGCACATGTCATGAAGCAGCCAGGGTTTTGTCAAGCCTGTGAAATAGCCTTTGCTGAGTGTGGTGGTGCAGTAAAGGGCTACATCGTGGAAGAAGAATTCCGAGATTCCATCCAATCCGCTCTCCTTAGCTGGAATGAGGACGAGGTCCATCGTCTTTTTCTGTTATTTGATGAGGATAAGGATGAAAAAGTTTACAAGGAAGATTTTCTTTCATGCCTTAGAAGAAATCCTCTTCTCATAGCTCTTTTTACACCTCAACCGGAGCTCAAGGAATCTTGTGGTAATGGAGTGCTGGAGATAGTTTGA 1611 0.4451 MADHTALTSPLLPSDHLILTVDSDSSSASSTATATVSPISNPFATLGFSGGELTVPPGITVDPFQNNKAGINGVYEWVKTIVCIPLALVRLVIFGLCLAIGYVATKLALYRWRDKENPMPRWRSGIMWVTRIAARFILFSFGYHWIKRKGKPAPREVAPIIVSNHVSYIEPIFYFYELFATIVASESHDSIPFVGTIIRAMQVIYVNRFSPSSRKQAVREIKRRASCDRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPIIVRYPHVHFDQSWGNVSLGQLMFRMFTQFHNFFEVEYLPVISPLDDKETAVHFRKRTSHAIATALNTVQTGHSYGDIMLHMRAQEAKQENPSGFMVEMAKVESLFHISSLEAVDFLDKFLAMNPDPSGHVQYRGFLSVLRLRACPLAEKIFAFIDVEKCGKITFKQFLYGSAHVMKQPGFCQACEIAFAECGGAVKGYIVEEEFRDSIQSALLSWNEDEVHRLFLLFDEDKDEKVYKEDFLSCLRRNPLLIALFTPQPELKESCGNGVLEIV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04576 536 SUPERFAMILY EF-hand 370 518 IPR011992 -
Vivi7g04576 536 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 58 361 - -
Vivi7g04576 536 CDD LPLAT_LPCAT1-like 134 342 IPR045252 GO:0008374
Vivi7g04576 536 SMART plsc_2 159 269 IPR002123 GO:0016746
Vivi7g04576 536 Gene3D - 359 516 - -
Vivi7g04576 536 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 126 330 - -
Vivi7g04576 536 ProSiteProfiles EF-hand calcium-binding domain profile. 479 514 IPR002048 GO:0005509
Vivi7g04576 536 Pfam Acyltransferase 156 263 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04576 Vivi-Chr7 117085543 117094547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04576 119 332 Acyl Lipid Metabolism Gene Families AT1G80950 30.612 5.38e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04576 K13510 - gmx:100818109 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04576 7 117085543 117094547 Vivi7g04576 7 117085543 117094547 ECH