Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi7g04538 | ATGGGTGTAAATGCAACCTCACGCACATTAGAAATCACAGTTATATCCGGGGAAAACATTCATGGATCAGAGGACGCGTATGTTGTCGTTCGAGGTGAGTCTCTAAATTGTCACACAACAAAAACAGTGAAAGCTAATAATGGTGTTGGAGAGAATTCGAGTTTTCTTTCGGGGAATGAGACGTTTATGTTGGACATGCCGTTGCATGCAAGGTCAGTCACGTTTGAGGTGCAAAGCAAGAAATTCAAAGGTGTTCATCCTATTGGAGTTGCGAGAATAGCGGTTGCGGATTTTCTTGATGGCGATGAATCGGAGAATTGTATGCGGGTTTTGAGCTATAGATTGAGGGATTGGGAAGGGAGGAAAAATGGAGTTATTCATTTTGGTGTGAGGGTGGTTGTGCCGGAGAAAATTTCAGTTACGGTGGCGGAAAAGGATGCCGTGGTGAGTGGAAAGAAATGCGGTGATAGTTTAGCTGGAGTAGATTTTGGTGGCAAGAATTCTAATGGTGTTGTTGTTATTGGTATTCCGATTTTGGCGAATTACCCTAATACTGTTATTTAA | 564 | 0.4255 | MGVNATSRTLEITVISGENIHGSEDAYVVVRGESLNCHTTKTVKANNGVGENSSFLSGNETFMLDMPLHARSVTFEVQSKKFKGVHPIGVARIAVADFLDGDESENCMRVLSYRLRDWEGRKNGVIHFGVRVVVPEKISVTVAEKDAVVSGKKCGDSLAGVDFGGKNSNGVVVIGIPILANYPNTVI | 187 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi7g04538 | 187 | Gene3D | C2 domain | 3 | 152 | IPR035892 | - | |
| Vivi7g04538 | 187 | PANTHER | INGRESSION PROTEIN FIC1 | 8 | 135 | - | - | |
| Vivi7g04538 | 187 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 132 | IPR035892 | - | |
| Vivi7g04538 | 187 | SMART | C2_3c | 9 | 107 | IPR000008 | - | |
| Vivi7g04538 | 187 | Pfam | C2 domain | 9 | 106 | IPR000008 | - | |
| Vivi7g04538 | 187 | ProSiteProfiles | C2 domain profile. | 1 | 108 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi7g04538 | Vivi-Chr7 | 116174870 | 116175754 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi7g04538 | - | - | vvo:131618362 | 374.015 |