Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi7g04537 | ATGGGTTTAACTTCACGTACACTAGAAATCACGGTTATATCAGGTGAAAACATTCAGGTATCAGAGGATGCATATGTTGTCGTTCGAGGCGAGTCTCTTGATTGTTACACAACAAAAACTGTGAAAGATAACAACTCTAGTTTCCTTTCATGGAATGAGAAGTTTTTGTTGGACATGCCATTGCATGCAAGGTCAATCACGTTTGAAGTGCAATGCAAGAAATTCAAAGGTGTTCACCCTATTGGAGTGGCAAGAATCGCGGTTGCGGATTTTCTTGATGGTGGTGAATCGGAAAGTTGTATGCAAGTTTTGAGCTATAGATTGAGGGATTGGGAAGGGAGAAAAAATGGAGTTATTCATTTTGGGGTGAAGGTGGTTGTGCCGGAGAAAAGATTGGTTACGGTGGCGGAGAAGGAGGTCGTGGTGAGTGGGAAGAAATGCGGTGATAGTTTAGCTGAAATGGATTATGGTGGCAAGAATTCTAATGGTGTTGTTGTTGGTATTCCGTTTTGGTGGAACTACCCTAACATTATTTAA | 537 | 0.4153 | MGLTSRTLEITVISGENIQVSEDAYVVVRGESLDCYTTKTVKDNNSSFLSWNEKFLLDMPLHARSITFEVQCKKFKGVHPIGVARIAVADFLDGGESESCMQVLSYRLRDWEGRKNGVIHFGVKVVVPEKRLVTVAEKEVVVSGKKCGDSLAEMDYGGKNSNGVVVGIPFWWNYPNII | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi7g04537 | 178 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 128 | - | - | |
| Vivi7g04537 | 178 | Gene3D | C2 domain | 3 | 146 | IPR035892 | - | |
| Vivi7g04537 | 178 | CDD | C2_SRC2_like | 7 | 121 | IPR044750 | GO:0006952 | |
| Vivi7g04537 | 178 | ProSiteProfiles | C2 domain profile. | 1 | 101 | IPR000008 | - | |
| Vivi7g04537 | 178 | Pfam | C2 domain | 7 | 98 | IPR000008 | - | |
| Vivi7g04537 | 178 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 124 | IPR035892 | - | |
| Vivi7g04537 | 178 | SMART | C2_3c | 7 | 100 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi7g04537 | Vivi-Chr7 | 116170630 | 116171657 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi7g04537 | - | - | vvo:131618362 | 288.115 |