Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04534 ATGGAAGCAAGAGAGAAACCAAAAACTCTCGAGCTAACAGTTTTATCAGCGCAAGACATCAACGTGAACGGAGAGCCGTCACTAACAAACGTCTTCGTCGTAGTTCGCGCCGAATCTACCACCTCCCACACAACACCGTTGAGCACCGCCGTAGGCGGCGTCCATTCATGGAACGAGAAGTTCACAGTGGAGTTGTCCACCTACGCAAGGTCCATCTCGTTCGAGGTAAAGTACCAAACGGCATCCGGTGTGAGAGACATCGGTGTGGCAAGAATAGCGGTTTCGGATTTTCTTGGAGGTTCGGTTCCGGAAAGTAATTTGCAGGTTTTGAGCTATGGGTTGAGGGATTGGAATGGACTCCGTTGTGGAGTGGTTAATTTCTCGGTTAGGGTTGTTTAG 399 0.4987 MEAREKPKTLELTVLSAQDINVNGEPSLTNVFVVVRAESTTSHTTPLSTAVGGVHSWNEKFTVELSTYARSISFEVKYQTASGVRDIGVARIAVSDFLGGSVPESNLQVLSYGLRDWNGLRCGVVNFSVRVV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04534 132 CDD C2_SRC2_like 9 127 IPR044750 GO:0006952
Vivi7g04534 132 Gene3D C2 domain 8 130 IPR035892 -
Vivi7g04534 132 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 131 IPR035892 -
Vivi7g04534 132 SMART C2_3c 9 106 IPR000008 -
Vivi7g04534 132 Pfam C2 domain 9 103 IPR000008 -
Vivi7g04534 132 PANTHER INGRESSION PROTEIN FIC1 8 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04534 Vivi-Chr7 116062949 116063623 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04534 - - psat:127137839 185.652