Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04527 ATGGCTGCAACTGCCTCTGCTTCCGCCTCATTCTCCCGCTTCTCTGCTATCTCAAAACCACCCCAACCGCAGTTCATCCTCTTCAACTTCCCCAACCGAACCAAACCCCCCTATTCTCGAACCAGCTCAACCCGGTTCACATGTTCCGCCGGTCAGGCCGGGCTATTCTCGAAAATAGGCCGGTTGCTAAAGGAGAAGGCAAAGAGCGACGTAGATAAGCTATTCTCCGGTTTCTCCAAGACTCGTAACAACCTCTCCGTCATCGATGAGCTTCTTCTTTACTGGAATCTCTCCGACACTGACAAAGTCCTCGACGAACTCGAAGAGGCTCTTTTAGTGTCTGATTTTGGGCCTAAAATTACTATAAAGATAGTGGAGAATTTGCGTAAGGATATACTTTCAGGGAAGCTTAAATCAGGGAGTGAGATAAAGGAAGCATTGAAGAAGAACGTTTTGGATTTGTTAAGCAGCAAGGGAAGTAAAACTGAGCTTCAACTTGGATTCAGGAAACCAGCCGTAATAATGATAATTGGTGTTAATGGTGGTGGGAAGACAACATCTTTGGGAAAGCTGGCTTATAGATTGAAGAATGGAGGTGCTAAGATATTGTTGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGCTCGAAATATGGGCTGAAAGGACCGGGTGTGAGATTGTTGTGGCTGAAACTGAGAAAGCCAAAGCATCAGAAGTGCTTTCAAAGGCTGTAAAAAGAGGAAAAGACCTAGGTTATGATATTGTATTATGTGATACGTCTGGACGTTTACACACCAATTACAGGCTCATGGAAGAGTTGATTTCTTGTAAAAAGGCTGTTGCTAAAGTAGTTGCTGGTGCACCCAATGAGATCCTACTGGTTCTGGATGGGACTACTGGTTTGAATATGTTGCCACAGGCCAGAGAATTCAATGAAGTTGTGGGTGTAACTGGTTTAGTTTTGACTAAACTTGATGGTTCTGCAAGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAACTCGGAATCCCTGTAAAATTTGTCGGTGTTGGCGAAGGTGTTGAAGACCTTCAACCCTTTGATGCAGAAGCATTTGTCAATGCCATTTTTATGTAG 1122 0.4465 MAATASASASFSRFSAISKPPQPQFILFNFPNRTKPPYSRTSSTRFTCSAGQAGLFSKIGRLLKEKAKSDVDKLFSGFSKTRNNLSVIDELLLYWNLSDTDKVLDELEEALLVSDFGPKITIKIVENLRKDILSGKLKSGSEIKEALKKNVLDLLSSKGSKTELQLGFRKPAVIMIIGVNGGGKTTSLGKLAYRLKNGGAKILLAAGDTFRAAASDQLEIWAERTGCEIVVAETEKAKASEVLSKAVKRGKDLGYDIVLCDTSGRLHTNYRLMEELISCKKAVAKVVAGAPNEILLVLDGTTGLNMLPQAREFNEVVGVTGLVLTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFM 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04527 373 FunFam Cell division FtsY, chloroplastic-like protein 61 162 - -
Vivi7g04527 373 Gene3D - 60 162 IPR042101 -
Vivi7g04527 373 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 346 359 IPR000897 GO:0005525|GO:0006614
Vivi7g04527 373 Pfam SRP54-type protein, helical bundle domain 100 149 IPR013822 GO:0005525|GO:0006614
Vivi7g04527 373 NCBIfam signal recognition particle-docking protein FtsY 100 372 IPR004390 GO:0006614
Vivi7g04527 373 SMART SRP54_3 171 373 IPR000897 GO:0005525|GO:0006614
Vivi7g04527 373 CDD FtsY 172 371 - -
Vivi7g04527 373 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 71 148 IPR036225 -
Vivi7g04527 373 Gene3D - 163 373 IPR027417 -
Vivi7g04527 373 FunFam Signal recognition particle receptor FtsY 164 373 - -
Vivi7g04527 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 371 IPR027417 -
Vivi7g04527 373 SMART AAA_5 170 343 IPR003593 GO:0016887
Vivi7g04527 373 SMART SRP54_N_2 74 155 IPR013822 GO:0005525|GO:0006614
Vivi7g04527 373 PANTHER SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA 52 372 - -
Vivi7g04527 373 Pfam SRP54-type protein, GTPase domain 171 372 IPR000897 GO:0005525|GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04527 Vivi-Chr7 115753908 115759656 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04527 K03110 - gmx:100791073 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04527 7 115753908 115759656 Vivi7g04527 7 115753908 115759656 ECH