Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04485 ATGGCAGAAACAACAAAAAGGTATGCAGTTGTTACAGGGGCAAACAAAGGAATAGGATTTGCAGTATGCAAACCATTGGCTTCTAAAGGGATCACTGTTGTGCTTACAGCAAGAGATCAAAAGAGAGGTCTTGAAGCTGTTGACAAATTGAAGCAGCTTTCTCTTCCTGGCCTTGTGGTTTTTCATCAACTTGATGTCACAGATCCTGCAAGTATTACATCATTTGCAGATTTTATCAAGAATCAATATGGAAAACTTGATATTTTGGTAAACAATGCTGGAATTCCTGGAGTTCAAGTGGACAGTGAGGCTCTGGCTGCTGCTAAATCTGCGGAAAATGGTGGCCAGATTGATTGGAGTAAAATACTAACTGATAGCTATGAACAAACTGAAGCAGGTATTAAAACAAACTACTACGGAGCCAAGGAATTAACCGAAGCACTTATTCCCCTTCTACGGCTTTCAACTTCACCAACAATTGTCAATGTTTCCTCATCCATGGGAAAGTTAGAGAAAATTCCAAATGGATGGCCTAAGGAAGTACTGAGTGATATTGAAAACCTTACTGAAGAAAAGATTGATGAAGTTTTGAACAAATTTCTAAAGGATTTTAAAGAGGGTGCAATAGTAGAAAACAAAGGCTGGCCTAGTAATATGTCTACATACATTATCTCGAAAGCTGCTCTAAGTGCCTACACAAGGGTTCTGGCTAAAAAGTTTCCATCAATATGCATCAATGCTGTTTGTCCGGGCTATGTGAAAACAGATATAAACTACAATACAGGTTATTTGACACCTGATGAAGGTGCTGAATCGATTGTGAGGTTGGCTTTGTTACCTGATGGGAGTCCTTCTGGCCACTTTTTTGTTAGAAATGAAGAGAAACCATTTTGA 894 0.3893 MAETTKRYAVVTGANKGIGFAVCKPLASKGITVVLTARDQKRGLEAVDKLKQLSLPGLVVFHQLDVTDPASITSFADFIKNQYGKLDILVNNAGIPGVQVDSEALAAAKSAENGGQIDWSKILTDSYEQTEAGIKTNYYGAKELTEALIPLLRLSTSPTIVNVSSSMGKLEKIPNGWPKEVLSDIENLTEEKIDEVLNKFLKDFKEGAIVENKGWPSNMSTYIISKAALSAYTRVLAKKFPSICINAVCPGYVKTDINYNTGYLTPDEGAESIVRLALLPDGSPSGHFFVRNEEKPF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04485 297 CDD carb_red_PTCR-like_SDR_c 7 297 IPR045313 GO:0016616
Vivi7g04485 297 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 295 - -
Vivi7g04485 297 Gene3D - 2 297 - -
Vivi7g04485 297 Pfam short chain dehydrogenase 8 170 IPR002347 -
Vivi7g04485 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 222 241 IPR002347 -
Vivi7g04485 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 IPR002347 -
Vivi7g04485 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Vivi7g04485 297 FunFam (+)-neomenthol dehydrogenase 2 297 - -
Vivi7g04485 297 Pfam Enoyl-(Acyl carrier protein) reductase 212 260 - -
Vivi7g04485 297 PRINTS Glucose/ribitol dehydrogenase family signature 241 258 IPR002347 -
Vivi7g04485 297 PRINTS Glucose/ribitol dehydrogenase family signature 222 241 IPR002347 -
Vivi7g04485 297 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Vivi7g04485 297 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Vivi7g04485 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 283 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04485 Vivi-Chr7 115385796 115387688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04485 2 176 Acyl Lipid Metabolism Gene Families AT3G55290 27.528 2.88e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04485 K15095 K26488 gmx:100803877 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04485 7 115385796 115387688 Vivi7g04485 7 115385796 115387688 ECH