Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04446 ATGATCTTTCTTCTAATTATTATATCAACTTTTTTCCTAAGCATTGAAGCTTCCACATGCAAACCAAGTGGAAGAATAACAGGAAAAAAGCTCAACTCAGGACACTGCAATAGAGGCCAAGATTCCAGCTGCTGCAAACCAGGAAAACCCTACACAACCTTCCAGTGTTCACCACAAGTTACACACCACACAAAAGCAACCCTAACACTGAACAGCTTTGAGAGAGGTGGAAGTGGAGGATCAGCATCGGCATGCGACAGCAAGTTTCACTCCGACAGCACGCCTGTTGTGGCATTATCAACCGGTTGGTTGAACAATCACAAGAGGTGTTTGAAGAAGATTGTTATATTTGGGAATGGGAAAAGAGTGAAGGCTTTGGTTGTTGATGAGTGTGATTCTACTAAAGGGTGTGATGCTACGCATGATTTTCAGCCTCCTTGTTTGAATAATATTGTGGATGGTTCTGCTGCTGTTTGGAAGGGGTTGGGTGTGCCTGAGAAAGATTGGGGGGAGATGGAAGTTTTTTGGTCAGATGCTTGA 540 0.437 MIFLLIIISTFFLSIEASTCKPSGRITGKKLNSGHCNRGQDSSCCKPGKPYTTFQCSPQVTHHTKATLTLNSFERGGSGGSASACDSKFHSDSTPVVALSTGWLNNHKRCLKKIVIFGNGKRVKALVVDECDSTKGCDATHDFQPPCLNNIVDGSAAVWKGLGVPEKDWGEMEVFWSDA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04446 179 Gene3D - 63 178 IPR036908 -
Vivi7g04446 179 CDD DPBB_kiwellin-like 51 178 - -
Vivi7g04446 179 SUPERFAMILY Barwin-like endoglucanases 65 177 IPR036908 -
Vivi7g04446 179 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 4 178 IPR039271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04446 Vivi-Chr7 114721668 114722207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04446 - - rcn:112181282 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04446 7 114721668 114722207 Vivi7g04446 7 114721668 114722207 ECH
Vivi6g02696 6 111441085 111441760 Vivi7g04446 7 114721668 114722207 PCT