Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04438 ATGAAGCTTTTAGATAATGAGGAAGCATCATCATCAAAGAATGTTGATGAAGTAAAAGTCGCTATTAATACTCCACTTATTTGTGGCCTTCCGGATGATATTTCTCTATTGTGCTTGGCAAGAGTTCCTAGAACATATCATTCAGTTCTGAGGGCTGTTTCAAAGAGATGGAGGGACTTAGTTTCTAGCAAAGAGTGGCTTCATTATCGTAGAAAGCACAAACTTGACGAGACATGGATCTATGCTTTGTGCAGGGACAAATTGGATCATGTATGCTGTTATGTTTTGGATCCAACCTCGTCAAGAAAATCTTGGAAGCTCATTCATGGGCTTCCGCCTCACATCGTGAGAAGGAAGGGTATGGGTTTTGAAGCTTTGGGAAATAAGCTTTTCTTATTGGGTGGTTGTGGCTGGTCTGAAGATGCTACTGACGAGGTTTATGCATACAATGCTTCCTCGAACTCTTGGGTTCAAGCTGCTTCTTTGTCAACTGCTAGGTGCTACTTTGCTTGTGAAGTTATGGACGAAAAACTATATGCTATTGGTGGCATAGGTTCAAATTCAAGTGATCCTCATTCATGGGATACTTTTGATCCTCGCATCAATGGTTGGTCATCTCACAGAGATCCAAATATCATTCCCGAAATTGAAGATTCAATAGTTATGGACGGAAAAATATACATCCGATGTGGCAAATCTCCTGTGACACCTCACGTGTATGCTGTTGTATACGAACCATCAAGTGGCACATGGCAGCATGCAGAAGCTGACATGGTTTCAGGATGGAGAGGTCCTGCGGTTGTTGTGGACGGAATCCTTTTCGTTTTGGATCAAAGTTCAGGTACCAGGCTAATGATGTGGCATAAACAGACACGCGAGTGGATACCGGTTGGTAAGTTGTCACCACTGCGTACAAGACCACCATGCCAACTTGTTGCAGTTGGTAAAAGCATTTATATAATCGGAAAAGAGCTTAGCACTGTGGTTGTTGATGTTGGCGATATTGAAAATACGGGAAGGTTGATGGTGGGTTCTTCTATACCTAAATTAGTCTCTGATTACAATGTAATTAGTTGTAAATGCTTGTCAATCTGA 1095 0.4183 MKLLDNEEASSSKNVDEVKVAINTPLICGLPDDISLLCLARVPRTYHSVLRAVSKRWRDLVSSKEWLHYRRKHKLDETWIYALCRDKLDHVCCYVLDPTSSRKSWKLIHGLPPHIVRRKGMGFEALGNKLFLLGGCGWSEDATDEVYAYNASSNSWVQAASLSTARCYFACEVMDEKLYAIGGIGSNSSDPHSWDTFDPRINGWSSHRDPNIIPEIEDSIVMDGKIYIRCGKSPVTPHVYAVVYEPSSGTWQHAEADMVSGWRGPAVVVDGILFVLDQSSGTRLMMWHKQTREWIPVGKLSPLRTRPPCQLVAVGKSIYIIGKELSTVVVDVGDIENTGRLMVGSSIPKLVSDYNVISCKCLSI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04438 364 PANTHER OS02G0202900 PROTEIN 8 335 IPR045887 -
Vivi7g04438 364 SMART kelc_smart 129 176 IPR006652 GO:0005515
Vivi7g04438 364 Pfam F-box domain 28 64 IPR001810 GO:0005515
Vivi7g04438 364 Pfam Kelch motif 165 190 IPR006652 GO:0005515
Vivi7g04438 364 Pfam Kelch motif 117 163 IPR006652 GO:0005515
Vivi7g04438 364 Gene3D - 71 339 IPR015915 GO:0005515
Vivi7g04438 364 SMART fbox_2 30 69 IPR001810 GO:0005515
Vivi7g04438 364 SUPERFAMILY Kelch motif 90 328 IPR015915 GO:0005515
Vivi7g04438 364 SUPERFAMILY F-box domain 21 76 IPR036047 GO:0005515
Vivi7g04438 364 CDD F-box_AtAFR-like 26 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04438 Vivi-Chr7 114615271 114617713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04438 30 305 Miscellaneous Gene Families AT4G33900 24.333 4.15e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04438 - - qsu:112035561 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04438 7 114615271 114617713 Vivi7g04438 7 114615271 114617713 ECH