Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04434 ATGGACCACAACGAACAAGTGTTAGAGTTTCTCGGATGCGTTCCGTTACTACAGAGGCTTCCAAGTTCGTCTATAAAGAAGATTTCAGAACTTGTTGTTGTTAAACACTATGAGCGAGGGGACTATGTGGCACGTGAGGAAGAACCAAGCGATGGAACTTACTTCATATGGGATGGAGAGGCTGAGGTTGTTGGACCTGTTAGTGCCCATGATGAAAATCGTCCAGAGTTCCAATTGAATAAATATGACTACTTTGGTTGTGGTTTATCAAATACAGTTCACAATGCAGATGTTGTTGCTTTGTCTAAGCTAACATGCTTAGTGCTTCCCCGTGAGCACTTAGCACTGCTATGGCCAAAGTCTATATGGAGCGCAGAAAAACATCCCGAGAGGTGCTCAGCTATGGAGAATATATTGCAATTGGAACCATTAGAGGTAGATATCTTCCAAGGAATCACTCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGACAGCTGGTTGGACAGGCACTAGCTGCCGCATCAAAATCTGTTGACTGTCTTAAGTTGCTTCATAGTCTGCATGCCTATTTTCTTCGTATAGGAGACTTACACATGCCTATCATATATCAAGTTTTTCGTCTCCGCGACGGGAAGAGCTTTGCTACACGGAAAGTGGATGCAATGCAAAACGGAAAAGTCATATTCACTTTGCTGGCTTCATTTCATGTAAAGGAATCAGCATTTGACCACCAGGAAGTAGCTATGCCATCTGTTCCTGCACCAGAAATGCTTCTGCCATTAGAAGAGCTACGGGAGAGACGTCTAACTGACCCTCGCTTGCCAATAACTTACCGGAACATCGTGGCTACTTCTGAGTTCATCCCCTGGCCCATAGAGATACGGTTCTGTGAACCTAAAGTTGCAACAAATCAGACAAAGTCTCCTCCCAGTTTGAGATACTGGTTTCGATCAAAGGGAAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTAGTAGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCACATCGTGGGAAAGGATTCAGGGCACGTGGCGTTAGTCTGGATCATGCAATGTGGTTTCACCGACCCGTAAAAGCTGATGAGTGGGTGCTATTTGCGGTCTTCACTCCCACTGCCTATGAAGCACGTGGCTTTGTCATAGGTCATATGTTCAATCAAAAGGAAGAGCTTCTTGTAACAGTAATTCAAGAAGGTTTGACGAGGAGAGTTGATCCCGAAATTTCAGCCACCAAATCTAAGTTGTGA 1293 0.4416 MDHNEQVLEFLGCVPLLQRLPSSSIKKISELVVVKHYERGDYVAREEEPSDGTYFIWDGEAEVVGPVSAHDENRPEFQLNKYDYFGCGLSNTVHNADVVALSKLTCLVLPREHLALLWPKSIWSAEKHPERCSAMENILQLEPLEVDIFQGITLPDAPRFGKVFGGQLVGQALAAASKSVDCLKLLHSLHAYFLRIGDLHMPIIYQVFRLRDGKSFATRKVDAMQNGKVIFTLLASFHVKESAFDHQEVAMPSVPAPEMLLPLEELRERRLTDPRLPITYRNIVATSEFIPWPIEIRFCEPKVATNQTKSPPSLRYWFRSKGKLSDDQALHRCVVAYASDLIFLQVSLNPHRGKGFRARGVSLDHAMWFHRPVKADEWVLFAVFTPTAYEARGFVIGHMFNQKEELLVTVIQEGLTRRVDPEISATKSKL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04434 430 CDD CAP_ED 16 114 IPR000595 -
Vivi7g04434 430 Gene3D - 133 419 IPR042171 -
Vivi7g04434 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 417 IPR029069 -
Vivi7g04434 430 PANTHER ACYL-COA THIOESTERASE 108 420 IPR003703 GO:0006637|GO:0047617
Vivi7g04434 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 242 IPR029069 -
Vivi7g04434 430 Gene3D Jelly Rolls 2 132 IPR014710 -
Vivi7g04434 430 CDD Thioesterase_II_repeat2 147 239 - -
Vivi7g04434 430 CDD Thioesterase_II_repeat1 314 415 - -
Vivi7g04434 430 FunFam Acyl-CoA thioesterase II 1 125 - -
Vivi7g04434 430 SUPERFAMILY cAMP-binding domain-like 6 118 IPR018490 -
Vivi7g04434 430 Pfam Cyclic nucleotide-binding domain 35 115 IPR000595 -
Vivi7g04434 430 Pfam Thioesterase-like superfamily 162 415 - -
Vivi7g04434 430 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Vivi7g04434 430 FunFam Acyl-CoA thioesterase II 130 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04434 Vivi-Chr7 114565691 114573030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04434 3 430 Acyl Lipid Metabolism Gene Families AT1G01710 64.252 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04434 K01068 - gmx:100803260 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04434 7 114565691 114573030 Vivi7g04434 7 114565691 114573030 ECH
Vivi7g04434 7 114565691 114573030 Vivi7g04434 7 114565691 114573030 PCT