Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04428 ATGGATAATTCTTCGAATTTCGACTCAACTTCTTCTGTGGATCAAAATGATCATTCAGTCAGTGAAACTCCTGAGTACTCGCCGTTCAGCGGAGATTCGTTCGCGTATTGTAGGACTAATTCTGAGGTTTCGATTTTATCTGAGACTGTTGATGATAATAGTTATGGTAGTGACCCTTCGCCTTCGCCGTGGATGAGTGCGAAACATGGAGCTGTTCTTTCGAGATTGGGGATGAAGCAGAGAAAACATTCATTGGATGGTAAATCTGATGATTTGGATATGTTGGAATCAGAGCTTGAAATGATGAAGGAAAGATTTTCTAAGCTGCTTTTGGGGGAAGATATGTCTGGTGGTGGTAAAGGTGTTTGCACTGCAGTTACAATATCAAATTCCATCACCAATCTCTATGCAACTGTGTTTGGACATAATTTGAAATTGGAGCCTCTAAAGCCTGAGAAGAAAGCTATGTGGAAAAGAGAAATGAATTGTCTTATGTCTGTTTGTGATTACATAGTAGAATTTGCACCAACTGCACAATACTTGGATGATGGCACAATTATAGAGATGATGACAAGTAGACCAAGGTCAGATATTTATATCAACCTTCCAGCTCTACAGAAGCTTGACACAATGCTCATAGAAATATTTGATAGTTTCCAGGATACTGAATTCTGGTATGCAGAACAAGGGAGCATATCAGGAAACTCAAACCGCAGTTCGCATTCAAACGCAGGCTCGCATTCGAATGCGGGTTCGCATTCGAATGCAGGCTCGTTTCGGATCATTGCTCAAAGAAAAGACGAGAAATGGTGGTTGCCAGTTCCTTGTGTCCACACCGGCGGCATCTCTGATAAGTCGAGGAAGCATTTGATTGAGAAACGAGATTGTGCTAATCAAATTCATAAAGCAGCTATGGCAATAAATAGCAGTGTTCTAGCTGAGATGGATATTCCAGAAACATACATGGCAAATCTTCCTAAGAGCGGAAGATCGAGTCTCGGGGACACGATTTATCGGTACATGCATTCTACGGACAAGTTTTCCCCTGGAAACCTTCTCGACTGTCTCAAAATAAGTACCGAACACGAAGCACTTGAACTAGCGGATAGAGTTGAATCTTCGATGTACACATGGAGACGAAAAGCTTGCTTAAGCCATTCGAAATCATCATGGAACAAAGTAAAAGCTCATATGGCTGACACTGATCAAAATGACAAAAACTTTGTCTTAGCCGAAAGAGCCGAGACTTTGTTGTTTTTCTTGAAACAAAGATATCCTGAACTCTCACAAACATCTTTGGACACATGCAAGATTCAATACAATCAAGATGTAGGGAAAGCAATACTAGAAAGCTATTCAAGAGTGTTAGAAGGATTAGCATTCAATATTGTTGCTTGGATTGAAGATGTTCTTTGTGCAGATAAATCTATGAGGAACTAA 1440 0.4042 MDNSSNFDSTSSVDQNDHSVSETPEYSPFSGDSFAYCRTNSEVSILSETVDDNSYGSDPSPSPWMSAKHGAVLSRLGMKQRKHSLDGKSDDLDMLESELEMMKERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGHNLKLEPLKPEKKAMWKREMNCLMSVCDYIVEFAPTAQYLDDGTIIEMMTSRPRSDIYINLPALQKLDTMLIEIFDSFQDTEFWYAEQGSISGNSNRSSHSNAGSHSNAGSHSNAGSFRIIAQRKDEKWWLPVPCVHTGGISDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDTIYRYMHSTDKFSPGNLLDCLKISTEHEALELADRVESSMYTWRRKACLSHSKSSWNKVKAHMADTDQNDKNFVLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAILESYSRVLEGLAFNIVAWIEDVLCADKSMRN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04428 479 Coils Coil 85 105 - -
Vivi7g04428 479 Gene3D PRONE domain, subdomain 1 91 244 - -
Vivi7g04428 479 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 38 478 IPR038937 GO:0005085
Vivi7g04428 479 MobiDBLite consensus disorder prediction 1 32 - -
Vivi7g04428 479 FunFam Rop guanine nucleotide exchange factor 2 316 440 - -
Vivi7g04428 479 FunFam Rop guanine nucleotide exchange factor 14 91 347 - -
Vivi7g04428 479 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 97 478 IPR005512 GO:0005085
Vivi7g04428 479 ProSiteProfiles PRONE domain profile. 89 479 IPR005512 GO:0005085
Vivi7g04428 479 Gene3D PRONE domain, subdomain 1 264 475 - -
Vivi7g04428 479 Gene3D PRONE domain, subdomain 2 316 440 - -
Vivi7g04428 479 MobiDBLite consensus disorder prediction 235 255 - -
Vivi7g04428 479 FunFam Rop guanine nucleotide exchange factor 14 349 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04428 Vivi-Chr7 114523929 114526923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04428 - - gmx:100785956 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04428 7 114523929 114526923 Vivi7g04428 7 114523929 114526923 ECH
Vivi7g04428 7 114523929 114526923 Vivi7g04428 7 114523929 114526923 PCT