LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g04426	ATGGGATCTAACTCGTTGAAGGATTATCTAAAGCGATACGAGAGTAACCCTGAAGAAGACAAGAAAAAGAAGAAGAGAAAGAGGAAAAATCAACCGCAAGCAACTGGTTTGTTAGTTGTGGATGAAGATCCAGCTTGGCAGAAACCCGTAGATCTGGTCGAAGAAAACGATGAGAACTTGTCAGATGGGGAGAAGCCAATAGTTGATGAAGACATTGAAGTAAAGCGAATGAAGAGGCTTGAGCAGCTGAAGGCCAGACGAGCTTACCATGATATATCTGAGGATGGAAGTGGTTGGATTCCACTTTCTTCTAAATCTGAGAATCTTAGTGACTCTAATCGAATGGATGCTGATTTATCTCCTTCGCGGCAGCAGTTGAAGCGCAATGACACTCCATCACCTGAGCGTGACTCAGAGCGTGAACTTTCTGAGGGACCGAGCCCTGATTTATCTCCTCCTCGTAAACAAAGGGATAGTGACATGTCACCTCCTCGACGGAAACATGTTTCTAATCCGAGTCCAGATATTTCTCCTCCTCGTAAACAAAGGGATAATGACATGTCACCTCCTCGACGAAAACATGTTTCTAATCCGAGTCCAGATATTTCCCCTCCTCGCCGTAGTAGTCGTCAAACATTTGAAAACAATGGGAGAAGAAAATATGATACTTCTGATTTGGAAGATCTTTCTCCACCGAGACGTGTTCGACATGATTCTCCATCTCAAGATACTTTACATGGATCGGTGTCATCTGATCTTTCACCACCGAGGAAACGCCAGCCTAGCGGTGCAAGATCAAATTTATCTGATGTTTCTCATCGTGGTTCACATCCATCTTTTGATCGTGACCTCTCTCCACCAAGGAAGAATGCGAAGGAGCTATCCGTTCCAGGATCTGTTAATGAAAGAAAAACAGGTTTGATTTCTGGTAAAGATATCAGAAAAGAGATCGACAGAAAGAAGAAGGATGATTTGTTGAGGCTTAAACAGATGGACCCTGTCATCAGTGGGCGCGGTGCTGAACCTGTATTTCGTGATAACAAAGGAGTACGCATTACCAAAGAGGAATACTTAAAGTCAAAACAGAAAGTAGAAGAGAAGCCCAAGGAGATTGAAATAGAATGGGGAAAGGGATTGGCTCAAAAGCGGGAAGCTGAGGCTAAGCAAAAGGAATTAGAAGTCGAGAAGGAAAAACCTTTTGCGCGGACCAGAGATGATCCCGAGCTTGACAAATCGTTGAAGGAGAGGATAAGATGGGGTGATCCTATGGCACATCTTGTAAAGAAGAAATATCCAGAGCCTGTTCTGCCGAACTTGGGGGATAGTGATAAAATGAGGGCATCTGGTTTTGTTGTCCCTCAAGATATTCCAGATCACAGCTGGTTGAAGAGGGGTTTAGATGCTGCTCCAAATCGCTATGGGATTAGGCCGGGACGACATTGGGATGGCGTTGATCGTAGTAATGGATTCGAGAAGGGAATGTTCAAGAGAACAAATGAGAGACAAGCTAAAGACAAAGAGGCTTATCTTTGGTCTGTCTCTGATATGTGA	1551	0.4404	MGSNSLKDYLKRYESNPEEDKKKKKRKRKNQPQATGLLVVDEDPAWQKPVDLVEENDENLSDGEKPIVDEDIEVKRMKRLEQLKARRAYHDISEDGSGWIPLSSKSENLSDSNRMDADLSPSRQQLKRNDTPSPERDSERELSEGPSPDLSPPRKQRDSDMSPPRRKHVSNPSPDISPPRKQRDNDMSPPRRKHVSNPSPDISPPRRSSRQTFENNGRRKYDTSDLEDLSPPRRVRHDSPSQDTLHGSVSSDLSPPRKRQPSGARSNLSDVSHRGSHPSFDRDLSPPRKNAKELSVPGSVNERKTGLISGKDIRKEIDRKKKDDLLRLKQMDPVISGRGAEPVFRDNKGVRITKEEYLKSKQKVEEKPKEIEIEWGKGLAQKREAEAKQKELEVEKEKPFARTRDDPELDKSLKERIRWGDPMAHLVKKKYPEPVLPNLGDSDKMRASGFVVPQDIPDHSWLKRGLDAAPNRYGIRPGRHWDGVDRSNGFEKGMFKRTNERQAKDKEAYLWSVSDM	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	242	274	-	-
	Vivi7g04426	516	Pfam	Pre-mRNA-splicing factor of RES complex	342	499	IPR018609	-
	Vivi7g04426	516	PANTHER	BUD13 HOMOLOG	3	516	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	1	70	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	151	165	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	47	70	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	99	128	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	212	241	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	129	144	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	386	407	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	86	319	-	-
	Vivi7g04426	516	MobiDBLite	consensus disorder prediction	275	289	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g04426	Vivi-Chr7	114514688	114519457	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g04426	K13106		-	gmx:100783213	650.203