Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04408 ATGGTTTCATTGGGAGCTATATATAGTGTTGCTTGTGTGTTCTTGTTTGGTGTTACTTTGGTTTTGGCTGGTGATATTGTTCATCATGATGATGTTGCTCCCACAAGACCTGGCTGTGAGAACAACTTTGTTCTGGTCAAAGTTCCAACTTGGATCGATGGTGTGGAGAACGATGAGTATGTTGGTGTCGGTGCGAGATTTGGTCCTACATTAGAATCGAAAGAAAAGCATGCCACTCATACCAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTAGCAAGCCTAAGAACAAGCTCACCAGTGAGATCATTTTGGTGCACCGAGGAAAATGTAGCTTCACAACCAAGGCAAATATAGCTGATGAAGCTGGCGCTTCGGCCATTATCATTATAAACAATCGTACAGAACTTTTCAAGATGGTTTGTGAGGTAAATGAAACTGATGTTGATATTGGGATTCCTGCTGTTATGCTTCCACAAGATGCTGGATTAAACTTGGAAAGACACATACAAAATAAATCCATAGTGGCCATTCAGTTATACTCTCCACTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTTTATGGCTTATGGCTGTCGGTACCATTTTATGTGCTTCTTATTGGTCCGCTTGGACTGCCAGAGAAGCTGTTATTGAGCAAGACAAGCTTTTAAAGGATGCTTCAGAAGAATATACTGCAGAAAGTGTTGGTTCTCGTGGTTATGTGGAAATCAGTACCACGGCAGCGATTTTATTCGTTGTGCTTGCTTCTTGTTTCTTGGTTATGCTATACAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGGATAGAGGGACTGCAAACTTGTTTGGTGGCTCTATTATCATGTTTCAGATGGTTTCAACATCCTGCGCAAACATACGTGAAGATACCGTTCTTTGGAGCTGTTCCATATCTGACACTGGCTATTACTCCATTCTGCGTAGTGTTTGCGGTTGTTTGGGCAGTTAAACGTCATGCGTCATATGCGTGGATTGGTCAAGATATTCTTGGTATCGCGTTGATAATTACAGTTCTTCAGATTGTTCGCATTCCAAATCTCAAGGTTGGGACTGTTCTTCTAAGTTGTGCTTTCCTATATGACATCTTATGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGACGGTATTCCCATGCTTCTCAAGTTACCACGTTTATTTGATCCTTGGGGTGGTTACAGCATCATCGGTTTCGGGGACATAATCTTACCGGGACTTCTAGTAGCATTTTCACTAAGATACGATTGGTTGGCAAAGAAAAACCTCCGAGCCGGATACTTTGTGTGGGCTATGACTGCATATGGTTTAGGTCTCCTCGTCACATATGTGGCTTTAAACTTGATGGATGGACATGGCCAGCCAGCTTTGCTTTATATAGTTCCATTTACACTTGGAACCTTCTTGTCATTGGGAAAGAAGAGAGGTGATCTGAAGATTTTATGGACAAGAGGAGAACCAGAAAGGCCATGTCCTCATATTCAAGAAGTTAACCAATCAATCAATTAA 1614 0.4195 MVSLGAIYSVACVFLFGVTLVLAGDIVHHDDVAPTRPGCENNFVLVKVPTWIDGVENDEYVGVGARFGPTLESKEKHATHTRVVMADPPDCCSKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAIIIINNRTELFKMVCEVNETDVDIGIPAVMLPQDAGLNLERHIQNKSIVAIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAVIEQDKLLKDASEEYTAESVGSRGYVEISTTAAILFVVLASCFLVMLYKLMSFWFVEVLVVLFCIGGIEGLQTCLVALLSCFRWFQHPAQTYVKIPFFGAVPYLTLAITPFCVVFAVVWAVKRHASYAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDILWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKLPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRAGYFVWAMTAYGLGLLVTYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGDLKILWTRGEPERPCPHIQEVNQSIN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04408 537 PANTHER SIGNAL PEPTIDE PEPTIDASE 68 526 IPR007369 GO:0004190|GO:0016020
Vivi7g04408 537 Pfam Signal peptide peptidase 241 521 IPR007369 GO:0004190|GO:0016020
Vivi7g04408 537 SMART psh_8 241 510 IPR006639 GO:0004190|GO:0016020
Vivi7g04408 537 SUPERFAMILY PA domain 99 138 IPR046450 -
Vivi7g04408 537 FunFam Signal peptide peptidase-like 3 45 184 - -
Vivi7g04408 537 Pfam PA domain 89 166 IPR003137 -
Vivi7g04408 537 Gene3D - 39 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04408 Vivi-Chr7 114325529 114329673 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04408 K09597 - gmx:100779540 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04408 7 114325529 114329673 Vivi7g04408 7 114325529 114329673 ECH
Vivi7g04408 7 114325529 114329673 Vivi7g04408 7 114325529 114329673 PCT