Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04403 ATGTCAGAAACTGACATGGCAGTTATTAATCCTGAGATGATGAAGCCTTATGTGTGGCTTCAAACTTCCGATGATTCAATCCAACAAGTGGAACAAGAGATTGCGATGTTTTGCCCATTTATATGTCAAGAAATAATACAAAAAAGCATGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACAAGTCAGTCCTGCAATGTTGAGCTTAATTCTTGATTATTGTCGATTTCATCAAGTACTAGGCCGCTCAAACAAGGAACGGAAGTCTTATGATGAGAAATTTGTCAGGATAGACACAGAGCGGCTCTGTGAGTTGACGTCTGCTGCGGACAGCCTTCAGTTAAAGCCATTGGTTGATCTCACCAGTCGTGCACTAGCTCGAATAATTGAAGGAAGATCGCCGGAGGAGATACGTGACATATTTCATTTGCCTGATGATCTTACAGAGGAAGAGAAATTGGAGCCCTTGAGAAACATAACTGACGATCCAAGGATTAGGCTTTTGAATCGCTTGTATGCCAAGAAGAGGAAAGAACTTAAAGAGCGTGAAAGGATAAAGAATGTTGAAGTTGAAGAAGAACATGTAGATGAACGATCAGTTGATGACCTTCTATCTTTTATTAATGGAAATGATGGAGATCCGAAGGGGATTAAAACTTCTAAAAATAAAAAGAAGAATCGAAGGAAAAAAGACCAGCAGAAGAATTCTTCTTTGAAGGAAGCATCTGTACCAGATAAAAAGGTAGAGGTAAACGGTCATAACATCAGACACCATAGTTCGGAAGCTGATAGACCGTGTGAGACCTCTAATTCACACCATACAGACGATGATCTTATGGTTGAGTTTGATGATGATGATACAGACGATGAGATTGATCCGATATTAAAGGCAAAAATTGACAGGGAAGTGGAAGATTTTGCCCGCAGATTAAATTCCGACTGGCCAGAGAGAATAAAAGACTTTTTGTCGTCGACACAAGAAAGGAAGACAATGCTTTTAACTACCACCAATGGGAATGGTTGTCTAAGGCGACATGCTTGA 1047 0.4002 MSETDMAVINPEMMKPYVWLQTSDDSIQQVEQEIAMFCPFICQEIIQKSMGSSKNCAICLPQQVSPAMLSLILDYCRFHQVLGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGRSPEEIRDIFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYAKKRKELKERERIKNVEVEEEHVDERSVDDLLSFINGNDGDPKGIKTSKNKKKNRRKKDQQKNSSLKEASVPDKKVEVNGHNIRHHSSEADRPCETSNSHHTDDDLMVEFDDDDTDDEIDPILKAKIDREVEDFARRLNSDWPERIKDFLSSTQERKTMLLTTTNGNGCLRRHA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04403 348 MobiDBLite consensus disorder prediction 207 278 - -
Vivi7g04403 348 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Vivi7g04403 348 SUPERFAMILY Skp1 dimerisation domain-like 90 159 IPR036296 GO:0006511
Vivi7g04403 348 SUPERFAMILY POZ domain 16 80 IPR011333 -
Vivi7g04403 348 MobiDBLite consensus disorder prediction 235 278 - -
Vivi7g04403 348 PANTHER SKP1 14 155 IPR016897 GO:0006511
Vivi7g04403 348 SMART skp1_3 15 116 IPR001232 GO:0006511
Vivi7g04403 348 FunFam SKP1-like protein 21 isoform X1 12 162 - -
Vivi7g04403 348 Coils Coil 223 243 - -
Vivi7g04403 348 Gene3D Potassium Channel Kv1.1; Chain A 14 161 IPR011333 -
Vivi7g04403 348 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04403 Vivi-Chr7 114317808 114325388 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04403 - - gmx:100794666 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04403 7 114317808 114325388 Vivi7g04403 7 114317808 114325388 ECH
Vivi7g04403 7 114317808 114325388 Vivi7g04402 7 114317806 114325388 ECH
Vivi7g04402 7 114317806 114325388 Vivi7g04403 7 114317808 114325388 PCT