Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04400 ATGGCTATGAGCGGTTTGATTTCCAACCGCAACTTCGGTTCCTTCGTTGCCTCAGGGAATTCGTATAGATCGCAAAAGGATTCGTCGCTTCAAAGAGGGGGAATTTCTGTTTCTGGTGTATCAGTAACGAGGTATGGTAATTGGATTGGGAAGGAGAGAGTTTCAAGATGCCAGCACACAATGCATTGTCGTATTGGTTCCACTTTGGAAGAGAGCGTTTCTAAACAAATACAAATGTTTGATGAAAGAAGGGAGGTTTTTTCTCCATTATCCCGACGATCTAACTGCTGTTCGAACTTCAAATTAAAAGCTTGCAAAAAAAGTTGTTCTTACCTTTCTTCAGCTCCGTTTAGCAGTAGCAATGTTGGACGCAGGAAGGTAAATACGCTGCGTGCTTGTTACAAGTCTGAGGATAGTGACATTGGAGAACCGAAGATTGATAGGCTGCAATCAACTGAAGGGAGTGGTGAAGCCATTCTTTTGGATGGGAATCTGAGTCAAGTATCTCCTTGGTGGCAGCAGTTTCCTAAGCGATGGGTTATTGTACTGCTATGTTTTACAGCATTTCTTCTGTGTAACATGGATCGCGTAAATATGAGTATAGCAATACTTCCAATGTCTCAAGAGTTCAACTGGAACAGTGCAACAGTTGGCCTCATTCAATCCTCTTTTTTCTGGGGTTATCTACTTACTCAGATTGTTGGTGGCATTTGGGCAGACAAAGTTGGTGGAAAGCTAGTACTTGGTTTTGGAGTTGTATGGTGGTCAATTGCAACAGTTTTAACACCTATTGCTGCAAAACTTGGGCTTCCATATCTGCTTGTTATGCGTGCTTTTATGGGAATTGGCGAGGGTGTTGCTATGCCTGCAATGAATAATATACTTTCCAAGTGGGTTCCAGTATCAGAGAGAAGCAGATCACTTGCACTAGTGTATAGTGGCATGTACCTTGGTTCTGTCACAGGATTGGCATTCTCACCTTTTCTGATCCACAAATTTGGGTGGCCATCTGTGTTTTACTCATTTGGATCACTTGGAAGTATCTGGTTTGCCTTGTGGTTGAGAAAAGCATACAGCACCCCAAAAGACGATCCAGATCTTGGGGTGGAAGAGAAAAGGCTCATACTTGGGGGCAGCGAATCAAAAGAACCTGTGACAGTTATTCCTTGGAAATTGATTTTATCAAAAGCGCCTGTCTGGGCTTTAATAATCTCTCACTTCTGCCACAATTGGGGGACATTTATTCTATTAACCTGGATGCCTACATACTACAATCAGGTTCTTAAGTTCAACCTCACGGAATCTGGGCTCTTATGTGTCCTTCCATGGTTAACCATGGCCATTTTTGCAAATATAGGAGGTTGGATTGCTGACACACTTGTGAGCAAAGGCCTTTCCATAACAACTGTTCGAAAGATCATGCAATCGATCGGGTTTTTGGGTCCTGCATTTTTTCTTACTCAGCTAAGTAATGTTAAAACACCAGCCATGGCAGTACTGTGCATGTCTTGCAGTCAGGGATGTGATGCATTCTCACAATCTGGTCTTTATTCCAATCACCAAGACATTGGACCGCGCTATGCTGGAGTGTTACTGGGACTATCAAATACTGCAGGAGTGCTTGCTGGTGTCTTTGGTACAGCTGCGACTGGATACATACTCCAACGAGGTTCATGGAATGATGTATTTAAAGTCTCAGTTATATTGTACTTAATTGGCACTTTGGTCTGGAATATCTTTTCAACTGGTGAGAAAATTCTAGACTGA 1767 0.4261 MAMSGLISNRNFGSFVASGNSYRSQKDSSLQRGGISVSGVSVTRYGNWIGKERVSRCQHTMHCRIGSTLEESVSKQIQMFDERREVFSPLSRRSNCCSNFKLKACKKSCSYLSSAPFSSSNVGRRKVNTLRACYKSEDSDIGEPKIDRLQSTEGSGEAILLDGNLSQVSPWWQQFPKRWVIVLLCFTAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQIVGGIWADKVGGKLVLGFGVVWWSIATVLTPIAAKLGLPYLLVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHKFGWPSVFYSFGSLGSIWFALWLRKAYSTPKDDPDLGVEEKRLILGGSESKEPVTVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVSKGLSITTVRKIMQSIGFLGPAFFLTQLSNVKTPAMAVLCMSCSQGCDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVSVILYLIGTLVWNIFSTGEKILD 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04400 588 Gene3D MFS general substrate transporter like domains 393 585 IPR036259 -
Vivi7g04400 588 SUPERFAMILY MFS general substrate transporter 168 580 IPR036259 -
Vivi7g04400 588 FunFam ascorbate transporter, chloroplastic isoform X1 386 586 - -
Vivi7g04400 588 FunFam ascorbate transporter, chloroplastic isoform X2 176 365 - -
Vivi7g04400 588 Pfam Major Facilitator Superfamily 185 546 IPR011701 GO:0022857|GO:0055085
Vivi7g04400 588 CDD MFS_SLC17A9_like 182 581 IPR044777 -
Vivi7g04400 588 Gene3D MFS general substrate transporter like domains 176 365 IPR036259 -
Vivi7g04400 588 ProSiteProfiles Major facilitator superfamily (MFS) profile. 181 585 IPR020846 GO:0022857
Vivi7g04400 588 PANTHER SOLUTE CARRIER FAMILY 17 171 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04400 Vivi-Chr7 114258865 114264125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04400 1 588 Organic Solute Cotransporters AT4G00370 73.299 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04400 K08193 - gmx:100793618 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04400 7 114258865 114264125 Vivi7g04400 7 114258865 114264125 ECH
Vivi7g04400 7 114258865 114264125 Vivi7g04400 7 114258865 114264125 PCT