Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04361 ATGTCTCAATTAATTAATAAAGCCAAGGACTTCGTCTCTGATAAAATCAGCGATGTAGCCAAGCCTGAAGCAAGTCTCAGCGATGTCGACTTCACGCGCGTGACCATGAACAATGTCGAGTACTTGGCCAAAGTCGCTGTTCATAATCCATATTCACATCCACTCCCTATTTGCGAGATCAACTACTCATTCAAAAGCGCCACTAGGGAGATAGCATCAGGGAGAATACCAGATCCAGGGTCGTTGAAAGCGAAGGATACAACAATGGTGGATGTGCCTGTGAAGGTGCCGTATAGTATATTGATGAGTTTGGCGAAGGATATTGGAGCTGATTGGGATATTGACTATCAGTTGGATTTGGGTCTTGTTATTGACCTTCCGGTGGTTGGTAACTTCACCATTCCTCTTTCTCGTAAGGGAGAGGTTAAGCTTCCAAAACCTTTCTAG 447 0.4452 MSQLINKAKDFVSDKISDVAKPEASLSDVDFTRVTMNNVEYLAKVAVHNPYSHPLPICEINYSFKSATREIASGRIPDPGSLKAKDTTMVDVPVKVPYSILMSLAKDIGADWDIDYQLDLGLVIDLPVVGNFTIPLSRKGEVKLPKPF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04361 148 PANTHER - 3 147 IPR045043 -
Vivi7g04361 148 SUPERFAMILY LEA14-like 2 146 - -
Vivi7g04361 148 SMART why 24 141 IPR013990 GO:0009269
Vivi7g04361 148 FunFam Desiccation protectant protein Lea14-like 17 147 - -
Vivi7g04361 148 Gene3D - 17 148 - -
Vivi7g04361 148 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04361 Vivi-Chr7 113413098 113413835 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04361 - - gmx:547533 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04361 7 113413098 113413835 Vivi7g04361 7 113413098 113413835 ECH
Vivi7g04362 7 113415718 113416373 Vivi7g04361 7 113413098 113413835 PCT