Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04347 ATGGCGGGAGAAACGGCATGGATCAGTCATTATGACGATGAAACTAGGAAGGAGACTAGGGATATTGATTTGTTATTGCAATCTAGCGAGGAAGTTGATAAAGAAGAAGCTGTTGTTTCGTTGGATGTAATGCCGGATGAGTTATTGGAGCGGATCCTAGCTTATCTCCCGGTTGCAAGCATTTTTAGAGCACGCAGTGTGAGTAAAAGATGGCATGAGATTGTTACTTCTAAAAGGTTTCTGTGGAATCCTTCCAACTCGCCACCGCAGAAGCCTTGGTACTTTATGTTTACTGGTTCTGAAGAGCCAACTGGCAGTGCTTATGATCCGAATCTTCGGAATTGGTATTGCATTGAGCTTCCGTTCATTGGAAATTCTAATTGGCTCATTTCATCTTCATGCGGCTTAGTTTGCTTCATGGATAACGGCAGCAGAAGCCAATTATGCGTGTGCAATCCTATTGCCAGAAGCTGCAGGGTGCTTCCGGAGCCTCCTGGGTTGAGATTTTCCGATTACGTCACATTAGCAATGTCGGTCGACAAGGAGTCCCATGGTTATACTGTGGGAATTGTGAAATCAAAGCAAGTTCCTGAAAACATTTTCCAATGGGATATCTCAATTCATGTTTACAAATCAGAGGAGGAGACTTGGGCGATGCTGCTAACCGAGGTTTTGATCGGGTGGAGAGGTGCAGACGAGAGTGTTATATGCAATGGTGTACTGTATTTCGTCGTTCAGTCTACCGGGGGCGTTCCATCAGAAAACCGTCATGCATTAGTTGCATATAATCTCTCCGGCCGATCTTCTCAAACTAGCTTAAGAAAGAGCTTTATTCCAGTACCATGTTCTCTATCATGTGCCCGTCTAATGAACATGAAGGAGAAGCTTGTAATGGTCGGAGGAATTGGAAAACCTGATCGACCCGACATAATCAAAGGAATCGGCATTTGGGTTCTTCATGACAGGAAATGGGAAGAGATTGTCCGAATGCCGCACAAATACTTCCAAGGCTTTGGAGAGTTTGACGAGGTTTTCGGTAGCAGAGGCATAGACGATCTTATATATATTCAAAGTTATGGATCTCCTGCCCTTCTCACATTCGACATGAACATTAAACAATGGAAATGGTCACAGAAATGCCCCGTTACAAAGAGGTTTCCTCTACAGGTTTTCTCTGGTTTTTGCTTTGAGCCTAGGCTCGACATTGCTCCATAG 1215 0.4428 MAGETAWISHYDDETRKETRDIDLLLQSSEEVDKEEAVVSLDVMPDELLERILAYLPVASIFRARSVSKRWHEIVTSKRFLWNPSNSPPQKPWYFMFTGSEEPTGSAYDPNLRNWYCIELPFIGNSNWLISSSCGLVCFMDNGSRSQLCVCNPIARSCRVLPEPPGLRFSDYVTLAMSVDKESHGYTVGIVKSKQVPENIFQWDISIHVYKSEEETWAMLLTEVLIGWRGADESVICNGVLYFVVQSTGGVPSENRHALVAYNLSGRSSQTSLRKSFIPVPCSLSCARLMNMKEKLVMVGGIGKPDRPDIIKGIGIWVLHDRKWEEIVRMPHKYFQGFGEFDEVFGSRGIDDLIYIQSYGSPALLTFDMNIKQWKWSQKCPVTKRFPLQVFSGFCFEPRLDIAP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04347 404 Gene3D - 34 84 - -
Vivi7g04347 404 ProSiteProfiles F-box domain profile. 38 85 IPR001810 GO:0005515
Vivi7g04347 404 NCBIfam F-box protein interaction domain 133 337 IPR017451 -
Vivi7g04347 404 PANTHER F-BOX FAMILY PROTEIN 7 401 IPR045048 -
Vivi7g04347 404 SUPERFAMILY Galactose oxidase, central domain 122 380 IPR011043 -
Vivi7g04347 404 FunFam F-box/kelch-repeat protein At3g61590 family 90 388 - -
Vivi7g04347 404 CDD F-box_AtFBW1-like 42 80 - -
Vivi7g04347 404 FunFam F-box/kelch-repeat protein At3g61590 38 84 - -
Vivi7g04347 404 Pfam F-box domain 44 81 IPR001810 GO:0005515
Vivi7g04347 404 SUPERFAMILY F-box domain 40 143 IPR036047 GO:0005515
Vivi7g04347 404 SMART fbox_2 44 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04347 Vivi-Chr7 113145324 113148102 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04347 - - gmx:100817678 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04347 7 113145324 113148102 Vivi7g04347 7 113145324 113148102 ECH