Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04343 ATGAAGGATTTGAATTCCGATCTCTTTGACCCTGTCACGGTGATGGAATCCGAATGGGCCCACGGTGGTTCTAACTCCGACGCCGATTTCGGTTTCGCTTTCAATGATAGTAATTTCTCCGATAGGATTCTTCGGATCGAGATCATGGCTGACCCCGTTGATCCTCAGCCGGATTCCGAAACTTGTACCACCATCGCCGATTGGGCCCGCCACCGTAAGAGGAGACGCGAGGATATCAAAAAAGATAACGTTGGAGATCTGCCGGATGAGCAAATTTTGAATGGGAACCAACCTGATATGGATGATTGTGTTGCTTCGGAAAATCAAGATGAAGAGGTTGTTGCGATGGTTGAAGAATCCCCTTCTGGTGATGAAGCTGTAAATAGCAATGATGATTTAAACCTGGGAATGGATTACGCCGAACCTGCGGTTGTTAGATTTAAAACCCTACATATCAGTTCTCCTATCTTGGCCGCAAAAAGCCCTTTTTTCTATAAGCTTTTCTCGAATGGGATGAGAGAATCAGAGCTTAGACATGTCACTCTCAGAATTAATGCCTCTGAGGAAGCTGCTCTGATGGAACTACTGAATTTTATGTATAGTAATACCTTGAGCATTAAAACTGCACCTGGTTTGCTTGATGTGTTGATGGCCGCTGACAAATTTGAAGTTGCTTCATGCATGCGATATTGTAGCCGGTTATTGCGTAATATTGCCATGACTCCTGAATCTGCATTGCTTTACTTGGAGCTTCCTTCTAGTGTCCTAATGGCTGAGGCAGTTCAACCACTAACTGATGCTGCAAAGCAGTATCTTGCTAGCAGATACAAGGATATAACCAAGTTCCAGGAAGAGGTTATGAACTTGCCCCTAGTTGGAGTAGAGGCGATATTATCTAGTGATGATCTCCAGGTTGCGTCAGAAGATGCTGTTTATGACTTTGTGTTGAAGTGGGCTAGACAACAGTATAGCAATGTGGAAGAAAGACGAATAGTCCTAGGTTCACGGCTTGCGAGACTAATTCGCTTCCCTTATATGACCTGCCGAAAGCTTAAGAAGGTCTTAACCTGTAGTGACTTTGAACATGATGTTTCATCCAAACTTGTACTTGAGGCCCTATTTTTCAAGGCAGAGGTTCCACATCGCCAACGGTCGCTGGCAGCAGAAGAGCCCACTTGCTCAAGCCGTCGTTTCTTGGAGAGGGCATACAAATATCGTCCTGTCAAGGTGGTTGAATTTGAACTTCCTCGCCAGCAGTGTGTGGTGTACTTGGATCTAAAGCGCGACGAGTGTAACAACTTGTTCCCATCTGGCCGGGTTTATTCTCAGGCATTTCACTTGGGTGGACAAGGGTTTTTTCTATCAGCACATTGTAACATGGATCAACAAAGCTCTTTCCATTGTTTTGGACTGTTTTTAGGAATGCAGGAAAAGGGTTCCGTGAGCTTCACTGTGGACTATGAATTTGCGGCAAGGTCAAGACCCACAGAGGAATTCGTTAGCAAATACAAAGGCAATTACACATTCACAGGTGGCAAGGCCGTCGGCTACAGAAACTTGTTTGCGATTCCGTGGACTTCATTCATGGCCGAGGACTGTCTTTACTTCATCAACGGTGTTCTACATCTCAGGGCCGAGCTCACCATCAGACACTGA 1656 0.4535 MKDLNSDLFDPVTVMESEWAHGGSNSDADFGFAFNDSNFSDRILRIEIMADPVDPQPDSETCTTIADWARHRKRRREDIKKDNVGDLPDEQILNGNQPDMDDCVASENQDEEVVAMVEESPSGDEAVNSNDDLNLGMDYAEPAVVRFKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNIAMTPESALLYLELPSSVLMAEAVQPLTDAAKQYLASRYKDITKFQEEVMNLPLVGVEAILSSDDLQVASEDAVYDFVLKWARQQYSNVEERRIVLGSRLARLIRFPYMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHRQRSLAAEEPTCSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKRDECNNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRH 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04343 551 SMART BACK_2 254 356 IPR011705 -
Vivi7g04343 551 ProSiteProfiles BTB domain profile. 131 208 IPR000210 GO:0005515
Vivi7g04343 551 CDD BTB_POZ_ZBTB_KLHL-like 144 222 - -
Vivi7g04343 551 SUPERFAMILY POZ domain 148 236 IPR011333 -
Vivi7g04343 551 FunFam BTB/POZ domain-containing protein POB1 273 377 - -
Vivi7g04343 551 SMART BTB_4 111 239 IPR000210 GO:0005515
Vivi7g04343 551 Pfam BTB And C-terminal Kelch 262 354 IPR011705 -
Vivi7g04343 551 Pfam BTB/POZ domain 148 236 IPR000210 GO:0005515
Vivi7g04343 551 Gene3D Potassium Channel Kv1.1; Chain A 142 259 IPR011333 -
Vivi7g04343 551 FunFam BTB/POZ domain-containing protein POB1 130 260 - -
Vivi7g04343 551 SUPERFAMILY TRAF domain-like 438 549 - -
Vivi7g04343 551 PANTHER OS02G0260700 PROTEIN 20 550 IPR045890 -
Vivi7g04343 551 Gene3D - 271 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04343 Vivi-Chr7 113073102 113076943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04343 - - gmx:100776595 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04343 7 113073102 113076943 Vivi7g04343 7 113073102 113076943 ECH